Christensenella minuta: B1H56_09265
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Entry
B1H56_09265 CDS
T05665
Name
(GenBank) ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cmiu
Christensenella minuta
Pathway
cmiu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B1H56_09265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmiu03019
]
B1H56_09265
03009 Ribosome biogenesis [BR:
cmiu03009
]
B1H56_09265
Enzymes [BR:
cmiu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B1H56_09265
Messenger RNA biogenesis [BR:
cmiu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B1H56_09265
Ribosome biogenesis [BR:
cmiu03009
]
Prokaryotic type
rRNA helicases
B1H56_09265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
CMS1
Helicase_C_2
ERCC3_RAD25_C
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AYH40659
LinkDB
All DBs
Position
complement(1954946..1956073)
Genome browser
AA seq
375 aa
AA seq
DB search
MSFSMQLSKEMNKTLYRIGYTKPTPIQEQTLPALLEKKDLIGLAQTGTGKTAAFMIPILE
NIFPPNRKVQALILCPTRELAMQTAKVAAELSAHLKGVRIVSVYGGQPAGIQIKALRTGA
QIVVGTPGRLKDLINRKVLKLKNVRTVVMDEADEMLDYGFLGDMKEILSAVPEQRQTMLF
SATMNKEITAIAGQFQKDPVRVKIGGQNRPVETVSQAYMQTKRKSNAVCGLIGRCAPRLT
LVFCNTKRKVKELQKELFHRGLASACLHGDMRQKERDTIMNTFRKGKTRVLIATDVAARG
IDIDKIDLVINYDVPDKPDYYVHRIGRTGRAGKDGKAYTLITPREHGKIKDLERKLHIRI
SREKNEEEANREAVS
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttttcgatgcagttatcaaaagaaatgaacaaaacgctttaccggatagggtac
acaaaaccgacgccgattcaggagcagacgcttccggcgctattggaaaaaaaggatctg
atcggccttgcgcaaacgggaacagggaagacggcggcgtttatgatcccgatcctggag
aatatttttccgcccaacaggaaggtgcaggcattgatcctgtgcccgacacgcgagctt
gcgatgcagaccgctaaggttgcggctgaactttcggcccacctgaaaggggtaaggatt
gtgagcgtttacggcggacagcctgcgggaatccagatcaaagccctgcggacaggcgcg
cagatcgttgtcggtacgcccgggcgtctgaaagaccttatcaaccgcaaggtgctgaag
ctgaaaaatgtgcgcacggtcgtgatggacgaagccgacgaaatgctggattacggattt
ctcggagatatgaaagaaattttgtccgctgtgccggagcagcgccagaccatgctgttc
tcggcaacgatgaacaaggaaatcacggcgattgcggggcagttccagaaagacccggtc
cgtgttaagatcgggggacagaaccgcccggtcgaaacggtctcgcaggcctatatgcag
accaaacggaaatcaaatgcggtatgcgggctgatcggccggtgcgctccccggcttacg
cttgtcttttgtaacaccaagcgtaaggtgaaagagctgcaaaaagagcttttccatagg
ggactcgcgtcggcctgcctgcacggcgatatgcggcaaaaggaacgggatacgatcatg
aataccttccgcaaaggaaaaacaagggtgctgatcgcaacggatgtcgcggcgcgggga
atcgatatcgataagatcgatctggtcatcaattatgacgtgccggacaaaccggattat
tacgtacaccgtatcgggcgaaccggacgcgcgggcaaggatggaaaagcatatacgctg
attacgccgcgtgagcacgggaaaataaaagatctggagcgcaaactccacatcaggatt
tcgcgcgaaaagaacgaggaagaggcgaatcgggaagcggtatcgtaa
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