Cronobacter malonaticus LMG 23826: AFK66_000130
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Entry
AFK66_000130 CDS
T04062
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cmj
Cronobacter malonaticus LMG 23826
Pathway
cmj03030
DNA replication
cmj03410
Base excision repair
cmj03420
Nucleotide excision repair
cmj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AFK66_000130
03410 Base excision repair
AFK66_000130
03420 Nucleotide excision repair
AFK66_000130
03440 Homologous recombination
AFK66_000130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmj03032
]
AFK66_000130
03400 DNA repair and recombination proteins [BR:
cmj03400
]
AFK66_000130
Enzymes [BR:
cmj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AFK66_000130
DNA replication proteins [BR:
cmj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AFK66_000130
DNA repair and recombination proteins [BR:
cmj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AFK66_000130
NER (nucleotide excision repair)
GGR (global genome repair) factors
AFK66_000130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
HHH_2
Prok-E2_E
Motif
Other DBs
NCBI-ProteinID:
ALX80462
LinkDB
All DBs
Position
complement(4082990..4085773)
Genome browser
AA seq
927 aa
AA seq
DB search
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLILQYQPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAKEAAAAGRAVLISTGDKDMAQLVTPDVTLINTMTNTVLGPEEVCAKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDALYANPEKIAELSFRGAKTMAAKLEQNK
EVAYLSYQLATIKTDVELELSHDRLEVQQPQADELLALFRQYEFKRWTSDLEAGKWLQSR
GKPAAKPTETIVVEAEPEEEAVALSAERYVTILDEETLQAWIERIKNAPVVAVDTETDSL
DNLTANLVGISFATEPGLAAYIPVAHDYLDAPDQLPRDRVLELLKPLLEDESLVKVGQNL
KFDRGILQNYGIELRGIAFDTMLESYILDSVSGRHDMDSLSSRWLKHTTITFEQIAGKGK
NQLTFNQIDLEQAGRYAAEDADVTLQLHLKMWPKLQQHKGPLNIFEHIEMPLVPVLSRIE
RNGVKIDPAVLHAHSQEIALKLTELEQKAHEIAGEPFNLSSTKQLQTILFEKQGIKPLKK
TPGGAPSTSEEVLEELALDYPLPKVILQYRGLAKLKSTYTDKLPQMINPKTGRVHTSYHQ
AVTATGRLSSTDPNLQNIPVRNDEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK
GLLSAFAEGKDIHRATAAEVFGLPLESVSNEQRRSAKAINFGLIYGMSAFGLSRQLNIPR
KESQKYMDLYFERYPGVLEYMERTRKQAKEQGYVETLDGRRLYLPDINASNAARRAGAER
AAINAPMQGTAADIIKRAMIAVDGWLQKEQPRVKMIMQVHDELVFEVHKDDVEAVSQKIH
ELMENSMQLDVPLLVEVGSGVNWDEAH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggttcagattccagaaaatccccttattctcgtcgatggctcctcttacctgtatcgg
gcgtatcacgcgtttccgccgctcaccaacagcgccggcgagccgacaggcgcgatgtat
ggcgtgctgaatatgctgcgcagcctgatactgcagtaccagccgactcacgcggccgtg
gtgttcgacgcaaaaggcaaaaccttccgtgatgaactgttcgagcactacaaatcgcac
cgcccgccgatgcctgacgatctgcgtgcgcaaatagagccactgcatgcgatggttaaa
gcgatggggctaccgctcctggcggtctccggcgtggaagcggacgacgttatcggcacg
ctcgccaaagaagccgccgcggcgggccgcgcggtgcttatcagcaccggcgataaagac
atggcgcagctcgtcacgccagacgtcacgcttatcaacactatgactaacactgtgctg
gggcccgaagaagtgtgcgcgaagtatggcgtgccgccggaacttatcatcgatttcctg
gcgctgatgggcgactcgtccgataacattccgggcgtgccgggcgtcggcgagaaaact
gctcaggcgctgttacaggggcttggcggtctggacgcgctttacgccaacccggagaaa
atcgctgagctctccttccgcggtgctaaaaccatggcggcgaagcttgagcagaacaaa
gaggtggcgtatctctcctatcagctggcgaccattaaaaccgacgtggagctggagcta
agccacgaccgtctggaagtgcagcagccgcaggctgatgaactgctggcgctcttccgg
cagtacgaattcaagcgctggacatccgatctcgaggccggcaaatggcttcagtcccgc
ggcaaacccgccgcgaagccgacagaaacgattgtcgtcgaagccgagccggaagaagag
gccgtcgcgctttctgcggagcgctatgtgactatccttgacgaagagacgcttcaggcg
tggatcgagcgcattaaaaacgcgccggtggtggctgtggataccgaaaccgacagcctc
gataacctgacggccaacctcgtcggcatctcgttcgccaccgagcctggtcttgcggcg
tatattccggtcgcgcatgattacctcgacgcgccggatcagcttccccgcgatcgcgtg
ctggagctactgaaaccgctgctggaagacgaatcgctggtgaaagtgggccagaacctc
aaattcgaccgcggcattttgcagaattacggcatcgaactgcgcggtatcgctttcgac
accatgctggaatcctatattctggacagcgtctctggccgccacgatatggacagcctc
tccagccgctggcttaaacacaccaccatcacgtttgagcagatcgccggcaaaggcaaa
aaccagctcacgtttaaccagatcgatcttgaacaggccgggcgctacgcggcggaagac
gccgacgtgacgctccagctgcacctgaaaatgtggccgaaactccagcagcacaaaggc
ccgctgaatatctttgaacatattgagatgccgctggtgccggtgctgtcgcgtatcgag
cgcaacggcgtgaaaatcgatccggcggtgctgcatgcgcactcgcaggagattgccctt
aagctcaccgagcttgagcaaaaagcgcatgagatcgcgggcgagccgttcaacctctcc
tccaccaaacagctgcaaaccatcctgtttgaaaagcagggcatcaagccgctgaagaaa
acgccgggcggcgcgccgtctacctcagaagaggtgctggaagagctggcgctcgactac
ccgctgccgaaagtcattctgcaataccgcggccttgcgaagctgaaatcgacttatacc
gataaactgccgcagatgattaacccgaaaaccggccgcgtgcatacctcctaccatcag
gcggttactgccaccgggcgtctgtcgtccaccgatccgaacctgcaaaacattccggtg
cgtaacgacgaaggccgccgtattcgccaggcgtttatcgcgccggaggattacgtcatt
gtctcagcggactactcgcagattgagctgcgcatcatggcgcatctctcgcgcgataaa
gggctgctcagcgcgtttgcggaaggtaaagacatccaccgcgcgacagcggcggaagtg
tttggcctgccgctggagagcgtctctaacgagcagcgccgcagcgccaaggcgatcaac
ttcggtcttatctacggcatgagcgcgttcggcctgtcgcgccagctcaatatcccgcgt
aaagagtcgcagaagtacatggatctttacttcgagcgttaccctggcgtgctggaatat
atggagcgcacccgtaagcaggcgaaagaacagggctatgtcgaaacgctggacgggcgt
cgtctctatctgccggatatcaacgccagcaacgcggcgcggcgcgcaggcgctgaacgc
gcagcgattaacgccccgatgcaggggacggccgcagacatcatcaaacgcgctatgatc
gcggtcgatggctggctacagaaagagcagccgcgcgtgaaaatgatcatgcaggtgcac
gatgaactggtgtttgaggtgcataaagatgacgtggaagcggtatcgcagaaaatccat
gagctcatggaaaatagcatgcagcttgacgtgccgttgctggtggaagtcggtagcggc
gtgaactgggatgaagcacactga
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