Cronobacter malonaticus LMG 23826: AFK66_000905
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Entry
AFK66_000905 CDS
T04062
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
cmj
Cronobacter malonaticus LMG 23826
Brite
KEGG Orthology (KO) [BR:
cmj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
AFK66_000905
Enzymes [BR:
cmj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
AFK66_000905
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Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
DUF7198
T4_deiodinase
Motif
Other DBs
NCBI-ProteinID:
ALX76838
LinkDB
All DBs
Position
50365..52323
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AA seq
652 aa
AA seq
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MRVSRSLTIKQMAMVSAVSVFFLFIFSVVLLFHFVQSHRYHTAMQMESIARSVRQPLSAA
ILKANIPEAEAILRQIKPAGVISRADVVLPNQFQALRMRFTPERPIPVTLARVFELPVQI
SLPLYSLERPANPQPLAYLVLQADSWRMYRFIINAISTLLTTFLLLALILSVAITWCINR
LILHPLRDITRTLNALDAHELAHHQLAIPRLHKDDEIGMLVRTYNRNQQALAQQLDEART
SGTRFPLTGLPNQALLVALLEQAVAGGGATALLYVACEPLREVDESQREALLLARVDKLR
SVLTPRMVLAQISQDDFAIIAHGVKTPEHAVTLTQQLLAALNEPSESDSGAPACAASIGV
AMFDGRQSASTLYQSAISAALDARRSGVNQVAFFGESPVSAQESAMQNALARRQYAVWLQ
PQVDMRNGNIVGAEALLRERQPDGEWSLPVGLIDNIESSGLIVTVGDWVLEEACQILARW
QAHGIMLPLSVNVSSLQLLKRDLVQTMLQRLERYAIKPGTLILEMTESQRIDDTEAAIAI
LRPLREAGVRIALDDFGMGYSSLSQLQKMKALPVDSLKIDKSFIDSLPDDDSVVSAIISM
AKKLNLELVAEGIQNEAQRDWLLNAGVTVGQGYLFGKAATPAAFEDGWLAKP
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
ttgcgagtcagtcgttccctcacgattaaacagatggcgatggtttcggccgtttccgtc
ttttttctttttattttcagcgtcgttttgctgtttcatttcgtgcagtcgcatcgctac
cacaccgccatgcagatggagagcatcgcccgctcggtgcgccagccgctctctgcggcc
attctgaaagccaatattccggaggcggaggcgatccttcgccaaatcaaacctgctggc
gtgattagccgcgcggatgtggtgttgcccaatcagttccaggcgttgcgcatgcgcttt
acgccggagcgccccattccggtgacgctcgcccgcgtttttgagctgccggtgcagatc
tccctgccgctctattcgctggagcggcccgccaacccgcagccgctcgcctatctggtc
ttgcaggccgactcctggcggatgtaccgctttattatcaatgcgatttcgacactgttg
accaccttcctgctgctggcgctgatcctctcggtggcgatcacctggtgtatcaaccgc
ctgatcctgcacccgctgcgcgatatcacgcgcacgctgaacgcgctggacgcgcatgag
ctggcgcatcatcagctcgctattccgcgtctgcataaggatgatgagatcggtatgctg
gtgcgcacctataaccgcaaccagcaggcgcttgcgcaacagctggacgaggcgcgcacc
agcggtacccgtttcccgctcaccggtttgccgaaccaggcgctgcttgtcgcactgctt
gagcaggctgtcgcgggcggcggcgcgaccgcgttgctgtatgtggcctgcgagccgctg
cgcgaggttgacgaatcgcagcgcgaggcgctcctgctcgcgcgcgtcgataagctgcgc
tcggtgctgacgccgcgtatggtgctggcgcagataagccaggacgatttcgcgattatc
gcgcacggcgtgaaaacgccggaacacgcggtgacgctgacgcaacaactgctggcggcg
cttaacgaaccgtcggagtcggacagcggcgcgccagcgtgcgcggcaagtattggcgtg
gcgatgttcgatggccgccagagcgcctcgacgctttaccagagcgcgatttccgccgcg
ctggacgcccggcgcagcggcgtcaatcaggtagcatttttcggcgaatccccggtgagc
gcgcaggaaagcgcgatgcagaacgcgctggcgcgccgccagtacgctgtctggctacag
ccgcaggtggatatgcgcaacggcaatattgttggcgcggaagcgctgctgcgcgagcgc
cagccggacggcgaatggtcgttaccggtggggcttatcgataatattgagtcgagcggg
cttatcgtcaccgtgggcgactgggtgctggaagaggcgtgtcagatactggcgcgctgg
caggcgcacggcattatgctgccgctgtcggtaaatgtgtcgtcgttgcagttgttaaag
cgcgatctggtgcagacgatgctgcaacggctggaacgctacgccattaagcccggcacg
ctgattctggagatgacggaaagccagcgcatcgatgataccgaagccgccatcgccatt
ctgcgccccctgcgtgaggcgggcgtgcgcatcgcgctggacgatttcggcatgggatat
tcgagcctgagccagttacagaagatgaaagcgctgccggtggatagcctcaaaatcgac
aaaagctttatcgatagcctgccggatgacgacagcgtggtatcggccatcatcagcatg
gcgaaaaagcttaaccttgaactggtggccgagggcatccagaacgaggcgcagcgcgac
tggctattaaacgcgggcgtgacggtgggtcaggggtatcttttcggcaaggcggcaacg
cctgcggcgtttgaagacggctggctcgcaaaaccgtaa
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