Cronobacter malonaticus LMG 23826: AFK66_003855
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Entry
AFK66_003855 CDS
T04062
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cmj
Cronobacter malonaticus LMG 23826
Brite
KEGG Orthology (KO) [BR:
cmj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmj03016
]
AFK66_003855 (truD)
Enzymes [BR:
cmj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AFK66_003855 (truD)
Transfer RNA biogenesis [BR:
cmj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AFK66_003855 (truD)
Prokaryotic type
AFK66_003855 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ALX77475
LinkDB
All DBs
Position
746335..747384
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AA seq
349 aa
AA seq
DB search
MSDFNTLRWLHGQPQGQGRLKTSPGDFQVVEDLGFAPDGDGEHLLVRIRKTGCNTRAVAD
ALAKFLGIAAREVSFAGQKDKYAVTEQWLCARLPGKEMPAMRAFTLEGCEVLEFARHRRK
LRLGALKGNRFSLVLRDITHRDEIEQRLGLIGEKGVPNYFGPQRFGRGGSNIYQAKRWAQ
TGQPPRERNKRGFALSAARSLMFNTLVSERLQRFGVNQVMDGDALQLAGRGSWFVATPEE
LTDLQARVDNGELLITAALPGTGDWGTQRAALAFEQTTLADETELLTLLTREKVEAARRA
MLLFPRELRWQWQDDATLEVSFWLPAGSFATSVIRELFNTADDVSDISE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttcaacacgctgcgctggctgcacggccagccgcaggggcaggggcgtctg
aagaccagcccgggcgattttcaggtggtcgaggatttaggcttcgcgccggacggcgac
ggtgaacacctgctggtgcgcatccgtaaaactggctgcaacacccgcgcggtggcggac
gcgctggcgaagtttctcggcatcgcggcacgtgaggtcagcttcgcggggcagaaagat
aaatacgccgtcacggagcagtggctgtgcgcgcgcctgccgggcaaagagatgcccgcg
atgcgcgcgtttacgctcgaaggctgtgaagtgctggaattcgcccgccaccgccgcaag
ctgcgtttaggcgcgctgaaaggcaaccgcttctcgctggtgctgcgcgatatcacgcac
cgcgatgaaatcgaacagcggctgggcctgattggcgaaaagggcgtgccgaactatttc
ggtccgcagcgtttcgggcggggcggcagcaatatttaccaggcgaagcgctgggcgcaa
accggccagccgccgcgcgagcgcaataagcgcggcttcgcgctctctgccgcgcgcagc
ctgatgtttaacacgctggttagcgaacgtctgcaacgcttcggggtgaatcaggtgatg
gacggcgacgcgctgcaactcgccgggcgcggcagctggtttgtcgccacgcctgaagag
cttactgatttacaggctcgggtggataacggcgagctgcttatcaccgccgcgctgccc
ggcaccggcgactggggcacccagcgcgcggcgctggcgtttgagcagacgacgcttgca
gatgaaaccgagctgctcacgctgctgacccgtgaaaaggtcgaggccgcccgacgtgcc
atgttactgttcccgcgcgagctgcgctggcagtggcaggacgacgcgacgcttgaggtg
agcttctggctgcccgccggcagcttcgccaccagcgttatccgggagctgtttaatacc
gctgacgatgtctcggatatcagcgagtaa
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