Cronobacter malonaticus LMG 23826: AFK66_004375
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Entry
AFK66_004375 CDS
T04062
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cmj
Cronobacter malonaticus LMG 23826
Pathway
cmj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFK66_004375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmj03400
]
AFK66_004375
Enzymes [BR:
cmj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AFK66_004375
DNA repair and recombination proteins [BR:
cmj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AFK66_004375
Prokaryotic type
AFK66_004375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALX77594
LinkDB
All DBs
Position
complement(896094..896783)
Genome browser
AA seq
229 aa
AA seq
DB search
MTDKLTWHDVLADEKEKPYFKKILTTVAAEREAGVTIYPPQKDVFNAFRFTELGDVKVVI
LGQDPYHGPGQAHGLAFSVRPGVAPPPSLVNMYKELEQSVPGFTRPSHGYLESWARQGVM
LLNTVLTVQAGKAHSHANLGWETFTDKVISLINEHREGVVFLLWGSHAQKKGAIIDRNRH
HVLQAPHPSPLSAHRGFFGCGHFVKTNQYLESRGEAPIEWMPVLPENAQ
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataaactgacctggcacgatgtgctggctgatgaaaaagaaaagccttacttc
aaaaagatcctgaccaccgtcgctgccgagcgtgaggcaggcgtcaccatctatccgccg
cagaaagatgtttttaacgccttccgctttaccgagcttggcgatgtgaaagtagtgatc
ctgggccaggacccttaccacgggccagggcaagcgcatggcctcgccttttcggtgcgg
ccgggcgtcgcgccgccgccgtcgctggtgaacatgtataaagagctggagcagtcggtg
ccgggtttcacccgcccttctcacggttatttagaaagctgggcgcgccagggcgtgatg
ctgcttaataccgtgctgacggtacaggcaggcaaagcgcattcccacgcgaatctgggc
tgggagacctttaccgataaggtgatctcgctgattaacgaacatcgtgaaggtgtggtg
tttctgctgtggggctcgcacgcgcagaaaaaaggcgcgattatcgaccgcaaccgccac
catgtattgcaggcgccgcacccgtcgccgctctccgcgcatcgcggtttcttcggctgc
ggtcatttcgtcaaaacgaatcagtacctggaaagccgtggcgaagcgcccatcgaatgg
atgcccgttctgccggaaaacgcccaataa
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