Cronobacter malonaticus LMG 23826: AFK66_004430
Help
Entry
AFK66_004430 CDS
T04062
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cmj
Cronobacter malonaticus LMG 23826
Pathway
cmj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AFK66_004430 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmj03019
]
AFK66_004430 (rnc)
03009 Ribosome biogenesis [BR:
cmj03009
]
AFK66_004430 (rnc)
03036 Chromosome and associated proteins [BR:
cmj03036
]
AFK66_004430 (rnc)
Enzymes [BR:
cmj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
AFK66_004430 (rnc)
Messenger RNA biogenesis [BR:
cmj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AFK66_004430 (rnc)
Ribosome biogenesis [BR:
cmj03009
]
Eukaryotic type
90S particles
RNase
AFK66_004430 (rnc)
Prokaryotic type
rRNA processing factors
AFK66_004430 (rnc)
Chromosome and associated proteins [BR:
cmj03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
AFK66_004430 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ALX77605
LinkDB
All DBs
Position
907615..908295
Genome browser
AA seq
226 aa
AA seq
DB search
MNPIVINRLQRKLGYTFHHQDLLQQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAEIAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVERLILTWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcgtaattaatcggcttcagcgaaagctgggctacacttttcatcatcag
gatctgttgcagcaggcattaacgcatcgcagtgccagcagcaaacataatgagcgtctg
gagtttctgggtgactccattttaagtttcgtgattgcgaacgcgctgtatcaccgtttt
ccgcgtgtcgatgaaggcgacatgagtcgtatgcgtgcaacgctggtgcgtggtaatacg
ctcgccgaaatcgcgcgtgaatttgagctgggcgagtgcctgcgccttgggccgggcgag
ctgaaaagcggcggttttcgtcgcgaatcgattcttgccgataccgttgaagccttaatt
ggcggcgtgttcctcgacagcgatatccagaccgttgagcgcttaattctcacctggtat
caaacgcgtctggatgaaattagtccgggcgataaacaaaaagatccgaaaacgcgtctg
caggaatatctgcaggggcgccatctgccgctgccgtcttacctggtggtacaggtgcgt
ggggaagctcacgatcaggaatttactatccactgccaggtaagtggcctgagcgaaccg
gtggtcggcacgggttccagccgccgcaaagcggagcaggcagccgctgagcaggcgctg
aaaaaactggagctggaatga
DBGET
integrated database retrieval system
