Cronobacter malonaticus LMG 23826: AFK66_004620
Help
Entry
AFK66_004620 CDS
T04062
Name
(GenBank) RpiR family transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
cmj
Cronobacter malonaticus LMG 23826
Brite
KEGG Orthology (KO) [BR:
cmj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmj03000
]
AFK66_004620
Transcription factors [BR:
cmj03000
]
Prokaryotic type
Helix-turn-helix
Other families
AFK66_004620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
HTH_6
SIS_2
MarR_2
B_lactamase-like_C
Motif
Other DBs
NCBI-ProteinID:
ALX77643
LinkDB
All DBs
Position
complement(948717..949490)
Genome browser
AA seq
257 aa
AA seq
DB search
MDNRLTPLLMRGESLTRAEYRVLSHLTAHPLRVGNITVRALAQETFVSTATIMRLCHKLG
FSGYSELIWHCKQLLTDTPHLAIKPDAAPDALPALFNRFVGNYQQTFRWVTPEKIAAFSE
LLREKERFFLYGAGFSYLFAEYLTKKLQVLGKTAFISGPGDSRNIFLSNAARYEVFIAVS
RSGETEQVLDKARIARNVGMEVVAFTRASPNPLAALSGLHFPLYDEAIHFAAEAAGITSF
ESNLVMLIDLLLLQAQA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggataaccgcctgaccccgctgctgatgcgcggcgagtcgctgacgcgcgccgagtat
cgcgtgctttcccacctgacggcgcatccgctgcgggtggggaatatcacggtgcgggcg
ctggcgcaggagacgtttgtctccaccgccaccatcatgcggctgtgccataagcttggc
ttcagcggttacagtgagcttatctggcactgtaagcaactgctcactgatacgccccat
ctcgccatcaaacccgatgccgcgcccgacgccctgcccgccctgtttaaccgctttgtc
ggcaattatcagcagacctttcgctgggtgacgcccgaaaagatcgcggctttcagcgaa
ctgttgcgggaaaaggagcgtttttttctctacggcgcggggttttcgtatctcttcgcg
gaatatctgaccaaaaagctacaggtgctcggcaagacggcgtttatctccggccccggc
gacagccgtaatatttttctcagcaacgcggcgcgctatgaagtgtttattgcggtatcg
cgcagcggcgaaacggagcaggtactcgacaaagcgcgcatcgcccgcaatgtcggtatg
gaggtggtggcgtttacccgcgcgtcgccaaatccgctggcggcactgtccgggctgcat
tttccactctatgacgaggctatccatttcgccgccgaagcggcggggatcacctcgttt
gaatccaatctggtgatgcttatcgacctgctgctgttacaggcgcaggcgtaa
DBGET
integrated database retrieval system
