Cronobacter malonaticus LMG 23826: AFK66_006330
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Entry
AFK66_006330 CDS
T04062
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
cmj
Cronobacter malonaticus LMG 23826
Brite
KEGG Orthology (KO) [BR:
cmj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmj03400
]
AFK66_006330
DNA repair and recombination proteins [BR:
cmj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
AFK66_006330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
SLFN-g3_helicase
AAA_16
Zn_Ribbon_1
zf-tcix
AAA_22
DUF7577
TerL_ATPase
LonC_helical
UPF0547
Motif
Other DBs
NCBI-ProteinID:
ALX77925
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Position
complement(1253108..1254868)
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AA seq
586 aa
AA seq
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MSFTLRPYQREAVDATLNHFRRHDAPAAIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYLALGLEADIYAAGLARKESHGKVVFGSVQSVARNLDHFQGEFSLVIVDECH
RISDDDDSQYQQILTHLRKQNPRLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKQQQRITPH
IVSQIVEFAADRRGAMIFAATVEHAREITGLLPAGEAALITGETPGRERDAIIEAFKAQQ
LRFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKKDCLILDYAGNP
HDLYAPEVGAPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDEG
HREQCDYRFRFKNCPHCNAENDIAARRCRECDNVLVDPDDMLKAALKLKDALVLRCGGMQ
LQPGADEKGEWLKVTYYDEDGADVSERFRLHTPAQRTAFEQLFIRPHTRTPGVPLRWITV
NDIIAQQALLRHPDFVVARLKGQYWQVREKVFDYNGRFRRANELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttactttacgtccctaccagcgcgaagcggtggatgccacccttaaccatttt
cgccgccacgacgcgccagcggcgatcgttctgccgaccggcgcaggcaaaagcctggtt
atcgccgaactggcgcggctcgcgcgcggccgcgtgctggtgctcgcccacgtaaaagag
ctggtggcgcaaaaccatgccaaatatctggcgctcgggcttgaggcggatatttacgcg
gccggtctcgcgcgcaaagagagccatggcaaggtcgtgttcggcagcgtgcagtcggtg
gcgcggaacctcgaccattttcagggagaattctcgctggtgattgtcgatgagtgccat
cgcatcagcgatgacgacgacagccagtatcagcaaattcttacgcacctgcgtaagcag
aacccgcgcctgcgcttactggggctgaccgcgacaccgtttcgcctcggcaaaggctgg
atttaccagttccattatcacggcatggtgcgcggcgatgaaaaagcgctgtttcgcgac
tgcatttacgagctgccgctgcgctacatgattaaacacggttacctgacgccgccggag
cgtcttgatatgcctgtcgtgcaatatgatttcagccgtttgcaggcccagagcaacggg
ctgttcagcgaggctgaccttaaccgcgagctgaaacaacagcagcgcatcacgccgcat
atcgtaagccagatagtcgaattcgccgctgaccgccgcggcgcgatgattttcgccgcg
accgtcgagcacgcgcgtgaaatcaccggcctgctgcctgcgggcgaagcggcgcttatc
accggcgaaacgccaggacgcgaacgcgacgcgatcattgaggcgtttaaagctcagcaa
ctgcgttttctcgtcaacgtggcggtactcaccaccggctttgacgcgccacatgtggat
ctcatcgctattctgcgcccgactgaatcggtcagcctctatcagcagattgtcgggcgc
gggctgcgattgtcaccgggcaaaaaagattgcctgatccttgattacgcgggcaacccg
cacgatctctacgcgcctgaagtgggcgcgccgaagggcaaaagcgacaacgtaccggtg
caggtcttctgccccgcctgcggtttcgctaataccttctggggcaaaaccacggcggac
ggcacgctgatcgaacatttcggccgccgctgtcagggctggttcgaagatgacgagggc
caccgcgaacagtgcgactaccgctttcgttttaaaaactgcccgcactgcaacgcggaa
aacgatatcgccgcgcggcgctgccgcgaatgcgacaacgtgctggtggacccggacgac
atgctgaaagcggcgctgaagcttaaagacgcgctggtgctgcgctgcggcgggatgcaa
cttcagccgggcgccgatgagaaaggcgaatggctgaaagtgacctattacgatgaagac
ggcgcggacgtcagcgaacgctttcgcctgcacacgcccgcgcagcgcaccgccttcgaa
cagctttttattcgcccgcacacccgcacgccgggcgtgccgctgcgctggattaccgtt
aacgatatcatcgcccagcaggcgctgctgcgtcaccccgatttcgtggtggccaggctc
aaaggccagtactggcaggtgcgtgaaaaggtgttcgattataacgggcggttccgccgc
gccaatgaattacgcggttag
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