Cronobacter malonaticus LMG 23826: AFK66_006435
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Entry
AFK66_006435 CDS
T04062
Name
(GenBank) endonuclease
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
cmj
Cronobacter malonaticus LMG 23826
Pathway
cmj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFK66_006435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmj03400
]
AFK66_006435
Enzymes [BR:
cmj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
AFK66_006435
DNA repair and recombination proteins [BR:
cmj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AFK66_006435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ALX77947
LinkDB
All DBs
Position
complement(1278543..1279400)
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AA seq
285 aa
AA seq
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MKFIGAHVSASGGVANAPARAAEIGATAFALFTKNQRQWRAAALTPAVIDEFKAACRQHG
YGPGQILPHDSFLINLGHPEPEALEKSRAAFIDELERCAQLGLTLLNFHPGSHLQQLSEE
ACLSRIAESVNIALDKTEGVTAVIENTAGQGSNLGFRFEHLAAIIDQVEDKSRVGVCIDT
CHAFAAGYDLRTEEDCENTFAEFDRIVGFQYLRGMHLNDAKSTFASRVDRHHSLGEGNIG
FTPFRWIMQQSHFDNIPLILETINPDIWNEEIAWLKAQQTGGAEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttataggcgcgcacgtcagcgcatcgggcggggtggcgaacgccccggcccgc
gcggcggaaattggcgcgacagcctttgcgctgtttaccaaaaaccagcgccagtggcgc
gcggcggcgctgacgcctgccgtcatcgacgagttcaaagccgcctgccgccagcatggt
tacggccccggtcagatcctgccgcacgacagttttctgattaacttaggccacccggag
ccggaagcgctggagaaatcccgcgcggcgtttatcgacgagctggagcgctgcgcgcaa
ctcggcctgacgctgctgaacttccaccccggcagccacctccagcagttaagcgaagag
gcgtgtttgtcgcgcatcgccgagtcggtaaatatcgcgctcgataaaaccgaaggcgtc
acagcggtgattgaaaacaccgcaggtcagggcagtaacctcggcttccgcttcgagcat
ctggcggcgattatcgaccaggtggaagataaatcccgcgtcggcgtctgcattgatacc
tgccacgccttcgccgcgggttacgatctgcgcaccgaagaagattgcgagaataccttc
gccgaattcgaccgcatcgtcggttttcagtatctgcgcggcatgcacctcaatgacgct
aaaagtaccttcgcgagccgggtcgaccgtcaccacagcttaggcgaaggcaacatcggc
tttacgccgtttcgctggatcatgcagcagtcgcatttcgacaacattccgctgattctg
gaaaccattaatccggatatctggaatgaggaaatcgcctggctgaaggctcagcaaacg
ggtggcgcagaggcataa
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