KEGG   Cronobacter malonaticus LMG 23826: AFK66_006435
Entry
AFK66_006435      CDS       T04062                                 
Name
(GenBank) endonuclease
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
cmj  Cronobacter malonaticus LMG 23826
Pathway
cmj03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cmj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AFK66_006435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmj03400]
    AFK66_006435
Enzymes [BR:cmj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     AFK66_006435
DNA repair and recombination proteins [BR:cmj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     AFK66_006435
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: ALX77947
LinkDB
Position
complement(1278543..1279400)
AA seq 285 aa
MKFIGAHVSASGGVANAPARAAEIGATAFALFTKNQRQWRAAALTPAVIDEFKAACRQHG
YGPGQILPHDSFLINLGHPEPEALEKSRAAFIDELERCAQLGLTLLNFHPGSHLQQLSEE
ACLSRIAESVNIALDKTEGVTAVIENTAGQGSNLGFRFEHLAAIIDQVEDKSRVGVCIDT
CHAFAAGYDLRTEEDCENTFAEFDRIVGFQYLRGMHLNDAKSTFASRVDRHHSLGEGNIG
FTPFRWIMQQSHFDNIPLILETINPDIWNEEIAWLKAQQTGGAEA
NT seq 858 nt   +upstreamnt  +downstreamnt
atgaagtttataggcgcgcacgtcagcgcatcgggcggggtggcgaacgccccggcccgc
gcggcggaaattggcgcgacagcctttgcgctgtttaccaaaaaccagcgccagtggcgc
gcggcggcgctgacgcctgccgtcatcgacgagttcaaagccgcctgccgccagcatggt
tacggccccggtcagatcctgccgcacgacagttttctgattaacttaggccacccggag
ccggaagcgctggagaaatcccgcgcggcgtttatcgacgagctggagcgctgcgcgcaa
ctcggcctgacgctgctgaacttccaccccggcagccacctccagcagttaagcgaagag
gcgtgtttgtcgcgcatcgccgagtcggtaaatatcgcgctcgataaaaccgaaggcgtc
acagcggtgattgaaaacaccgcaggtcagggcagtaacctcggcttccgcttcgagcat
ctggcggcgattatcgaccaggtggaagataaatcccgcgtcggcgtctgcattgatacc
tgccacgccttcgccgcgggttacgatctgcgcaccgaagaagattgcgagaataccttc
gccgaattcgaccgcatcgtcggttttcagtatctgcgcggcatgcacctcaatgacgct
aaaagtaccttcgcgagccgggtcgaccgtcaccacagcttaggcgaaggcaacatcggc
tttacgccgtttcgctggatcatgcagcagtcgcatttcgacaacattccgctgattctg
gaaaccattaatccggatatctggaatgaggaaatcgcctggctgaaggctcagcaaacg
ggtggcgcagaggcataa

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