Cronobacter malonaticus LMG 23826: AFK66_008340
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Entry
AFK66_008340 CDS
T04062
Name
(GenBank) transcriptional regulator
KO
K03746
DNA-binding protein H-NS
Organism
cmj
Cronobacter malonaticus LMG 23826
Brite
KEGG Orthology (KO) [BR:
cmj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmj03036
]
AFK66_008340
03400 DNA repair and recombination proteins [BR:
cmj03400
]
AFK66_008340
Chromosome and associated proteins [BR:
cmj03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
AFK66_008340
DNA repair and recombination proteins [BR:
cmj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AFK66_008340
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF3037
PaaX_C
DUF6626
TetR_C_24
STX6_10_61_N
Motif
Other DBs
NCBI-ProteinID:
ALX78451
LinkDB
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Position
complement(1792444..1792857)
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AA seq
137 aa
AA seq
DB search
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEIEERTRKLQQ
YREMLIADGIDPNELLNSMSAAKTGTKAKRAARPAKYRYTDENGESKTWTGQGRTPAVIK
KAIDEQGKQLDDFLIKD
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcacttaaaattctgaacaacatccgtactcttcgtgcacaggcgagagaa
tgtactctggaaactctggaagagatgctggagaaattagaagtggttgtaaatgagcgc
cgtgaagaagaaagcgccgccgctgcggaaatcgaagaacgtactcgtaaattacagcag
taccgtgaaatgctgatcgctgacggtattgatccgaatgaattactgaacagcatgtct
gccgctaaaaccggtactaaagctaaacgtgctgcgcgtccggctaaatatcgttacacc
gatgaaaacggcgagagcaaaacctggactggccagggccgtacccctgcagtgatcaag
aaagccatcgacgagcagggtaaacagctggacgatttcctgatcaaggattaa
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