Cronobacter malonaticus LMG 23826: AFK66_008590
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Entry
AFK66_008590 CDS
T04062
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
cmj
Cronobacter malonaticus LMG 23826
Pathway
cmj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cmj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AFK66_008590
Enzymes [BR:
cmj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
AFK66_008590
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_10
DUF3105
Motif
Other DBs
NCBI-ProteinID:
ALX78502
LinkDB
All DBs
Position
complement(1848008..1850002)
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AA seq
664 aa
AA seq
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MKDDLENNLLYRYCGAASPFWRLPLDSNALQLAASEQAVTSHVVPLTPEQAAQIRNMSVI
TSSVTLSLSLFGEPVPVHLVGRKVSRKEWAGTASAWHDTTSVARDLVQGLSFAEQVVSEA
NSVIVILDRHGNIQRFNRLSEEYTGLKEHEVIGQNVFKLFMTPAEASASRRNITGFFRNG
SSYEVERWIKTRKGQRLFLFRNKFVHSGSGRNEIFLICSGTDITEERRAQERLRVLANTD
AITGLPNRNAIHEMISDAIAKRGDTQVGVVYLDLDNFKKVNDAYGHMFGDQLLQAVSLAI
LSCLEKDQVLARLGGDEFIVMATDTSQAALEAMSSRIITRLKHPFRIGLIEVYTGCSLGI
ALAPQHGDDRESVIRNADTAMYTAKENGRGKFCVFCPEMNQRVFEYLWLDTNLRKALEKN
QLVIHYQPKMLANGDVHSLEALVRWQSPERGLISPLDFISYAEESGLIVPLGRWVMLNVV
RQVATWRDAGIDLRVAVNVSARQLADQTLISDLRQALTDMRFTQSPIDVEITESCLIENA
ELALSVINEFSALGAQVHLDDFGTGYSSLSQLARFPLDAIKLDQSFVRDVHKQPVSQSLV
HAIVAVAKALNLQVIAEGVESEEEDAFLMQNGVDQRQGFLFARPMTATELEHWYQRYQAG
KQTP
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgacctggagaataatctgctgtaccgctactgcggcgccgctagtcctttc
tggcgactgccgctggacagcaacgcgttgcagcttgccgccagcgaacaggccgtcacc
agccacgtggtgccgctgacgccggaacaggccgcgcaaatccgcaacatgagtgtgatc
acctcaagcgtcacgctctcgttatcgctgtttggcgaaccggtgccggtgcatctggtg
ggccgcaaagtctcccgtaaagagtgggcgggcacggcgtcggcgtggcatgacaccacc
tcggtggcgcgcgatctcgtgcagggactctccttcgcggagcaggtggtttctgaagcc
aactcggtaattgtcatcctcgatcgccacggcaatatccagcgcttcaaccggctgagc
gaagaatatacgggcctgaaagaacacgaagtgatcgggcagaatgtctttaagctgttt
atgacgcctgctgaagcgtccgcgtcgcggcgtaatatcaccggtttttttcgcaacggc
agttcctatgaggtcgagcgctggatcaaaacccgcaaaggccagcggctgtttctgttt
cgcaataagtttgtccacagcggcagcgggcgaaacgaaattttcctgatctgctccggc
accgatatcaccgaagagcgccgcgcgcaggagcgcctgcgcgtgcttgccaacaccgac
gccatcaccggcctgcccaaccgcaacgctatccatgagatgattagcgacgccatcgct
aaacgtggcgacacgcaggtaggcgtggtctatctcgatctcgacaatttcaagaaagtt
aatgacgcctacgggcatatgttcggcgatcagcttctccaggcggtgtcgctcgcgatt
ttaagctgtcttgaaaaagatcaggtgctggcgcggcttggcggcgatgagtttatcgtg
atggcgacggatacctcgcaggcggcgctggaagccatgtcctcacgcattatcacccgg
ctgaagcacccgtttcggatcgggcttatcgaagtttacaccggctgctcgctgggcatt
gcgctggctccacagcacggcgacgatcgcgaaagcgtcatccgcaacgccgataccgcg
atgtacaccgccaaagagaacgggcgcggtaaattctgcgtcttttgcccggagatgaat
cagcgggtattcgaatatctttggctcgataccaacctgcgtaaggcgctggagaaaaat
cagctggttattcactatcagccgaaaatgttggccaacggcgatgtacacagcctggaa
gcgctggtgcgctggcagtcgccggagcgcgggctgatttcgccgcttgattttatctcc
tacgccgaagagtccgggcttatcgtaccgctcgggcgttgggtcatgctgaatgtggtg
cgtcaggtggcaacgtggcgcgatgcgggtatcgacctgcgggttgcggtgaacgtatca
gcgcgccagctcgctgaccagacgctgataagcgatctgcgtcaggcactgactgacatg
cgcttcacccaaagccccattgacgtggagatcaccgaaagctgtctgattgaaaatgcc
gagctggcgctgtcggtgattaatgaattcagcgcgctgggcgcgcaggtgcatctggat
gatttcggcaccggctattcgtcgctttcgcagctggcgcggtttccgctggatgccatt
aagctcgatcaaagcttcgtgcgcgatgtccataagcagcccgtgtcgcaatcgctggtt
cacgccatcgtcgcagtggcaaaagcgctgaatttgcaggtgatcgccgaaggcgtggaa
agtgaagaagaagatgcgtttctgatgcaaaacggcgtcgatcaacggcaggggtttctc
ttcgcccgtccgatgacggcaaccgagcttgaacactggtatcagcgttatcaggccggg
aaacagacgccgtaa
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