Cronobacter malonaticus LMG 23826: AFK66_011280
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Entry
AFK66_011280 CDS
T04062
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cmj
Cronobacter malonaticus LMG 23826
Pathway
cmj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFK66_011280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmj03400
]
AFK66_011280
Enzymes [BR:
cmj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AFK66_011280
DNA repair and recombination proteins [BR:
cmj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AFK66_011280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
ALX78954
LinkDB
All DBs
Position
2362929..2363735
Genome browser
AA seq
268 aa
AA seq
DB search
MKFISFNINGLRARPHQLAALVEQHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK
GHYGVALLTKATPVSVRRGFPGDGEEAQRRIIMAEIPSSIGDITVINGYFPQGESRDHEV
KFPAKAKFYQDLQDYLETALSNDKPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL
PEEREWMGRLLNWGLKDTFRHANPETSDRYSWFDYRSKGFDDNRGLRIDLLLASDPLMAR
LADTGIDYDIRAMEKPSDHAPVWATFSL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcatctcttttaacatcaatggcctgcgcgcccgccctcatcagcttgccgcg
ctggtggaacagcatcagccggacgtcatcggcctgcaggaaactaaagtccacgacgat
atgttccctctcgaagaggtggcgaaactgggctacaacgtcttttatcatggccagaaa
ggccactacggcgtggcgctgctaaccaaagcaacgccggtttccgtgcgccgcggcttt
ccgggcgacggtgaagaggcgcagcgccgtatcatcatggccgaaatcccttcttctatc
ggtgatattacggtcatcaacggctatttcccgcagggcgagagccgcgatcacgaggtg
aaattcccggccaaagcgaagttttatcaggatttgcaggactatcttgaaacagcgctg
agcaacgataagccagtgctgattatgggcgatatgaatatcagcccaggcgatctggat
atcggcatcggcgaagagaaccgcaagcgctggctgcgtaccggcaaatgttcgttcctg
ccggaagagcgcgaatggatgggccgcctgctgaactgggggcttaaagatacgttccgt
cacgctaaccccgaaacgagcgaccgctactcctggttcgactaccgctcgaaaggcttt
gacgataaccgcggcctgcgcatcgacctgctgctggcgagcgatccgctgatggcgcgc
ctggccgataccggcatcgattacgacatccgcgcgatggaaaaaccctccgatcacgcg
ccggtctgggcgaccttctcgctgtaa
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