KEGG   Cronobacter malonaticus LMG 23826: AFK66_012470
Entry
AFK66_012470      CDS       T04062                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
cmj  Cronobacter malonaticus LMG 23826
Brite
KEGG Orthology (KO) [BR:cmj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmj03400]
    AFK66_012470 (helD)
Enzymes [BR:cmj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AFK66_012470 (helD)
DNA repair and recombination proteins [BR:cmj03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    AFK66_012470 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 DEAD
Other DBs
NCBI-ProteinID: ALX79135
LinkDB
Position
complement(2548170..2550224)
AA seq 684 aa
MELKATSLGKRLAQHPYDRAEILTAGVKVSGDKHEYLIPFNQLLGIQCRRGLVWGELEFT
LPDNKVVRLHGTEWAETQRFYHHLMALWQQWSQEMSEVAAGVLNAWREKLRSSEAQEKWL
KRDESEALCHALRRALQALPMPTSRLEAFDNCRDAWRECQAWLADSEAKRLLHNQAYTDA
MLTRYADFFSQIESSPLNPSQARAVVNGESSLLVLAGAGSGKTSVLVARAGWLIERGEAT
TEQILLLAFGRQAAKEMEDRLQARLHTDAITARTFHALALQIIGQGGRKTPRVSELENDT
AARHELILNAWREQCREKKAQAKGWRQWLTDELEWDVDDGDFWEDEALGKRLASRLDRWL
GLMRMHGGSQAEMIAAAPDEVRDLFQKRVKLMAPLLKAWKAALKAEEAVDFSGLIHQAIN
VLEKGRFVSPWKHILVDEFQDISPQRAALLAALRRQNSATSLFAVGDDWQAIYRFSGAQL
SLTTAFEAHFGQGDQCALDTTYRFNGRIGEIANRFIQQNPHQCEKPLNSLRAGDKNAVTL
LAQEQLEALLDKMSGYVRPDERILVLARYHHLRPAALEMAATRWPKLQLEFMTIHASKGQ
QADYVIILGLNEGREGFPAPARESIMEQALLPPPEDFPDAEERRLLYVALTRARHRVWLL
YDKAAPSVFVEALSHLGVPTARKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaactgaaagcaacctctctgggtaaacgtctggcgcagcacccctatgaccgcgcg
gaaatcctcaccgccggggtgaaagtctccggcgataaacatgaatatctgatcccgttt
aatcagttgctgggcatccagtgccgtcgtggactggtctggggcgagctggaattcacg
ctgccggataacaaagtcgttcggctgcacggcaccgagtgggccgaaacccagcgcttt
taccatcatctgatggcgctctggcagcagtggagccaggagatgagcgaggtcgcggcg
ggcgtgctaaatgcctggcgggagaaactgcgcagcagcgaagcccaggaaaagtggctt
aagcgcgacgagagcgaggcgctgtgccatgcgctgcggcgggcgttgcaggcgctgccg
atgccgacatcgcgcctggaggcgttcgataactgccgcgacgcctggcgcgaatgtcag
gcctggcttgccgacagtgaggcgaagcgtcttttgcataatcaggcttataccgacgcg
atgctgacgcgctacgccgatttcttctcgcagattgaaagctcgccgcttaatccgtcg
caggcgcgagccgtcgtcaacggcgaaagttcgctgctggtgctggcaggcgccgggagc
ggcaaaacctctgtgctggtggcgcgcgcgggctggcttatcgagcgcggtgaggcgacg
acggagcagatcctgctgctcgccttcgggcgtcaggccgccaaagaaatggaagatcgg
ctgcaggcgcggctgcatacggatgccattaccgcacgcacgtttcatgcgctggccttg
cagattatcggccagggcgggcggaaaaccccgcgcgtcagcgagctggaaaacgatacc
gcggcgcggcatgaacttatactgaacgcctggcgcgaacagtgccgcgagaaaaaagcg
caggcgaaggggtggcgtcagtggctgaccgacgagctggagtgggacgttgatgacggc
gatttctgggaggacgaggcgctgggcaaacggctggcgagccggcttgaccgctggctg
gggctgatgcgcatgcatggcggctcgcaggccgagatgatagccgccgcgcccgacgag
gtacgcgatctgttccagaagcgcgtcaaactgatggcaccgctgctgaaagcctggaaa
gcggcgctgaaagccgaagaggccgtcgatttctccgggcttattcatcaggcgattaac
gtgctggaaaagggccggttcgtcagcccgtggaagcatattctcgtggacgagtttcag
gatatctcgccacagcgcgcggcgctgctggcggcgctgcgccgtcagaattccgccacc
agcctgtttgcggtgggtgatgactggcaggctatctaccgctttagcggcgcgcagctt
tcgctgacgacagcgtttgaggcgcatttcggccagggcgatcagtgcgcgctggatacc
acctaccgctttaacgggcgcatcggtgaaatcgccaaccgctttatccagcaaaacccg
caccagtgcgaaaaaccgcttaacagtttgcgcgcgggcgacaaaaacgccgtgacgctg
cttgcgcaggagcaactggaggcgctgctcgacaaaatgagcggctacgtgcgcccggat
gagcgcattctggtgctggcacgctaccaccatctgcgcccggcggcgctggagatggcc
gcgacccgctggccgaagctgcaactggaatttatgactatccacgccagtaaagggcag
caggcggattatgtaattattctcgggcttaacgaggggcgggagggctttccggcaccg
gcgcgggaatccatcatggaacaggcgttgttgccgccaccggaggatttcccggatgcc
gaagagcggcgtctgctctatgtggcgctgacccgcgcgcggcaccgcgtctggctgctg
tatgacaaagcggcgccgtcggtgtttgtcgaggcgttgtcgcatctcggcgtgccaacg
gcccgtaagccgtaa

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