Cronobacter malonaticus LMG 23826: AFK66_014875
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Entry
AFK66_014875 CDS
T04062
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cmj
Cronobacter malonaticus LMG 23826
Brite
KEGG Orthology (KO) [BR:
cmj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmj03400
]
AFK66_014875
DNA repair and recombination proteins [BR:
cmj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AFK66_014875
Archaeal homologous recombinant proteins
AFK66_014875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ALX79596
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All DBs
Position
3082141..3083355
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AA seq
404 aa
AA seq
DB search
MRILHTSDWHLGQNFYAKSRAAEHEAFLDWLLEAAVAHQVDAIIVAGDIFDTGAPPSYAR
ELYNRFVVKLQAANCPLIVLGGNHDSVATLNESRELLACLNTHVIASAQLTPETQATLLY
RRDGEPGAVLCPVPFLRPRDVLRSLGGQSGREKQQQLLEAISLHYQQSYEAACQLRGERN
LPIIATGHLTTVGVTKSDAVRDIYIGTLDAFPADRFPPADYIALGHIHRAQKVAGCEHIR
YSGSPIALSFDETGKEKSVYLVEFADGKLRDVTALPVPVSQPLAVLKGSLESITAQLEQW
RDAPDEPKVWLDIEIDTAEFLHDMHRQISVLTESLPVEVVLLRRSREMRARALGTLSTET
LSELGPEEVFERRLELEAFEEPEKARLRTLFARTLESLHEEDEA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattctgcatacctcagactggcatcttggtcaaaatttttacgccaaaagccgc
gccgccgaacatgaagcctttctcgactggctgctggaggcagcggttgcgcatcaggta
gatgcgattatcgtcgcgggcgacatcttcgataccggcgcgccgccaagctatgcgcgt
gagctctataaccgctttgtggtcaaactccaggcggcgaactgcccgcttatcgtgctc
ggcggcaaccacgattcggtggcgacgctcaatgaatcccgcgaactgctggcctgcctc
aatacccacgttatcgccagcgcgcagcttacgccagaaacgcaggccacgcttttatac
cgccgcgacggcgaacctggcgcggtgctctgtccggtgccgtttttgcgcccgcgcgac
gtgctgcgaagccttggcgggcagtcgggccgtgaaaagcagcagcaactgctggaggcc
atcagcctgcactatcaacagagctatgaggccgcctgccagcttcgcggcgagcgtaac
ctgccgattatcgcgaccggccatctgaccaccgttggcgtaaccaaaagtgacgcggta
cgcgacatttatataggcacgctcgacgccttccccgcagaccgctttccccccgccgat
tacattgcgctcgggcatattcaccgcgcccagaaagtggcgggctgcgagcatatccgc
tacagcggctcgccgattgcgctgagctttgatgaaaccggcaaagagaaaagcgtttat
ctggtggagtttgccgatggcaaactgcgcgacgtcacggccctgccggtgccggtcagc
cagccgctggcggtgctgaaaggcagcctggagtccattaccgcgcagctcgaacagtgg
cgcgacgcgccggacgagccgaaagtctggctcgatatcgaaatcgacaccgctgaattt
ctgcatgatatgcaccgccagataagcgtgctcaccgaaagcctgccggtggaggtcgtt
ctgctgcgccgcagccgcgaaatgcgcgcgcgcgcgctcggcacgctcagcaccgaaacg
cttagcgagctggggccggaagaggtgtttgaacgacgccttgaactggaggcgtttgag
gagccggagaaagcgcgcctgcgcacgctcttcgcccgcacgctggagagcctgcacgag
gaggatgaggcatga
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