Cronobacter malonaticus LMG 23826: AFK66_015845
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Entry
AFK66_015845 CDS
T04062
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cmj
Cronobacter malonaticus LMG 23826
Pathway
cmj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFK66_015845 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmj03019
]
AFK66_015845 (pcnB)
Enzymes [BR:
cmj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AFK66_015845 (pcnB)
Messenger RNA biogenesis [BR:
cmj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AFK66_015845 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ALX79809
LinkDB
All DBs
Position
3323907..3325274
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AA seq
455 aa
AA seq
DB search
MLNREESVVDEGVAQPAITIIPREQHAISRKDISENALKVMYRLNKAGYEAWLVGGGVRD
LLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEENA
GDRATSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGLNDLKEGI
IRLIGDPETRYREDPVRMLRAVRFAARLDMRISPETGEPIPRLATLLNDVPPARLFEESL
KLLQTGYGYATYRLLCEYNLFQPLFPGISRYFTEKGDSPMERIIAQVLKNTDHRIHNDMR
VNPAFLFAAMYWYPQLEMAQKIAQESGLAYYDAFALAMNDVLDEACRSLAIPKRITTLIR
DIWMLQLRLSRRQGKRAWKLMEHPKFRAAYDLLALRAEAENNSELQRLTNWWGEFQSAAP
PMQKDMLNDLGDEPAARRRTRRPRRRTSPRREGNA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaaccgcgaggagagcgtggttgacgaaggcgtcgcacagcccgccataaccatt
atcccgcgtgaacagcacgctatctcccgcaaagatatcagcgagaacgcgcttaaagtg
atgtaccgcctgaataaagccggttatgaagcctggcttgtcggcggtggtgtgcgcgat
ctgctgcttggcaaaaagccgaaagatttcgacgtcaccaccaacgccacgccggatcag
gtacgcaagctgttccgcaactgccgcctggttggccgccgtttccgcctggcccacgtc
atgttcgggccggaaatcattgaagtcgccacctttcgcggccatcacgaagagaacgcg
ggcgatcgcgccacttcccagcgaggccagaacggcatgctgctgcgcgacaacattttc
ggctcgattgaagaagacgcccagcgccgcgatttcaccatcaacagcctctattacagc
gtggccgatttcacggtacgcgattacgtgggcggcctgaacgatcttaaagaagggatt
atccgtcttatcggcgatccggaaacccgctaccgcgaagatccggtgcgtatgctgcgc
gcggtgcgcttcgccgcccggcttgatatgcgcatcagcccggaaaccggcgagcctatc
ccgcgcctcgccacgctgctcaacgatgtgccgccggcgcgtctgtttgaagagtcgctg
aagctgttgcagaccggttacggctatgcgacttatcgtctgctgtgcgaatacaatctg
ttccagccgctgttcccgggcatcagccgctatttcaccgagaaaggcgacagcccgatg
gagcgtatcatcgcgcaggtgctgaagaacaccgatcaccgcattcataacgacatgcgc
gtgaacccggcgttcctgttcgccgcgatgtactggtatccgcagctcgaaatggcgcag
aaaatcgcccaggagagcggccttgcgtactacgacgcgttcgcgctcgccatgaatgac
gtgctggatgaagcctgccgctcgctcgcgatcccgaaacgcatcacgacgcttatccgc
gatatctggatgctgcagctgcgcctgtcgcgccgtcagggcaaacgcgcctggaagctg
atggagcacccgaaattccgcgcggcttacgatctgctggcgctgcgcgccgaagcggaa
aacaacagcgagctgcaacgcctgacgaactggtggggtgaattccagtccgccgcgccg
ccgatgcaaaaagatatgctcaacgatctgggcgacgagccggccgcgcgtcgccgcacg
cgtcgtccacgccgtcgcacttccccgcgccgcgagggtaacgcgtga
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