Cronobacter malonaticus LMG 23826: AFK66_017770
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Entry
AFK66_017770 CDS
T04062
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cmj
Cronobacter malonaticus LMG 23826
Pathway
cmj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFK66_017770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmj03019
]
AFK66_017770
03016 Transfer RNA biogenesis [BR:
cmj03016
]
AFK66_017770
Enzymes [BR:
cmj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AFK66_017770
Messenger RNA biogenesis [BR:
cmj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AFK66_017770
Transfer RNA biogenesis [BR:
cmj03016
]
Prokaryotic type
tRNA degradation factors
AFK66_017770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
OB_RRP5_4th
aRib
KH_2
S1_RRP5
KH-I_KHDC4-BBP
Spt6_S1
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
ALX80119
LinkDB
All DBs
Position
complement(3676825..3678960)
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKKAKPGQDFFPLT
INYQERTYAAGRIPGGFFRREGRPSEGETLIARLIDRPLRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKSSKLDLVVA
GTESAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQNINDLVKEAGKPRWDWQPEAANE
ALNARVKALAESRLSDAYRITDKQERYSQIDAIKADVIAALQAEQAEGDALDENELGDIL
HAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLG
TERDAQNIDELMGERTDRFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPA
ADRFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGENFVV
LSDILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITKEIMQVALNQAKGARLHILGVM
EQAINAPRGDIFQFAPRIHTIKISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKI
AATDGEKAKHAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADK
RVEKVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQTQEAAAPAAPEAE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgtccgcaaatttcagtatggtcaacatactgtcactcttgaaacc
ggaatgatggctcgtcaggccactgctgccgtgatggtaagcatggatgacactgcggta
ttcgtgaccgtagttggcgctaaaaaagcgaagccgggccaggactttttcccgctgacc
attaactatcaggagcgtacctacgctgctggccgcatccctggtggtttcttccgtcgt
gaaggccgtccgagcgaaggcgaaacgctgatcgcgcgtctgattgaccgcccgctgcgt
ccgctgttcccggaaggcttcgttaacgaagttcaggttatcgcgaccgttgtttccgtt
aacccgcaggttaacccggatatcgtcgcgatgattggcgcgtccgctgcgctgtctctg
tccggtattccgttcaacggcccgattggtgccgcgcgtgtgggttacatcaacgatcag
tacgtactgaacccgacccaggacgagctgaaatccagcaagctggatctggttgttgct
ggtactgaaagcgccgtgctgatggtggaatctgaagctgaactgctgagcgaagatcag
atgctgggcgctgtggtgttcggccacgagcagcagcaggttgtgattcagaacatcaac
gatctcgtgaaagaagcgggcaaaccgcgctgggactggcagcctgaagccgctaacgaa
gcgctgaatgcgcgcgtgaaagcgctggctgaatctcgtttgagcgacgcgtaccgcatc
actgacaaacaagaacgttacagccagatcgacgctatcaaagcggacgttatcgcggca
ctgcaggctgaacaggccgaaggcgacgcgcttgacgaaaacgagctgggcgacatcttg
cacgctatcgagaagaacgttgttcgttctcgcgtactggctggcgaaccgcgtatcgat
ggccgcgaaaaagacatgatccgtggtctggacgtgcgcaccggcgtactgccgcgtact
cacggttccgcgctgttcacccgtggtgaaacgcaggcgctggttaccgctacgctcggt
accgagcgcgacgcgcagaacatcgacgaactgatgggcgagcgtactgaccgcttcctg
ttccactacaacttccctccgtactctgtcggcgaaaccggcatggttggttctccgaag
cgtcgtgaaatcggtcacggtcgtctggcgaaacgcggcgtactggcagtgatgccggca
gctgaccgcttcccgtacactgtacgcgtagtgtctgaaatcaccgaatccaatggttct
tcttccatggcttccgtgtgtggcgcttctctggcactgatggacgcaggcgtgccgatc
aaagccgctgttgcgggcatcgcgatgggcctggtgaaagaaggcgaaaactttgtcgtg
ctgtccgacattctgggtgacgaagaccacctgggcgacatggacttcaaagtagcgggt
tcccgtgaaggtatcactgcgctgcagatggatatcaaaatcgaaggcatcaccaaagag
atcatgcaggtggcgctgaatcaggctaaaggtgcgcgtctgcatatccttggcgtgatg
gaacaggctatcaacgcgccgcgtggcgatatctttcagttcgcaccgcgtattcacact
atcaagatcagcccggacaagatcaaagacgtgatcggtaaaggcggttctgtgattcgt
gcgctgactgaagagaccggcactaccatcgaaatcgaagatgacggtacggtgaaaatc
gcagcgaccgacggcgagaaagcgaaacacgcgattcgtcgtatcgaagagattaccgct
gaaatcgaagtgggccgtatctacaatggtaaagtgacccgtatcgttgacttcggtgcc
tttgtcgctatcggcggcggtaaagaaggtctggtacacatctctcagatcgccgacaag
cgcgttgagaaagtgaccgactatctgcagatgggtcaggaagtaccggttaaggtactg
gaagttgaccgtcagggccgcgtacgtctgagcattaaagaagcaaccgagcagactcag
gaagcagcagcccctgctgcgccggaagccgagtaa
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