Cronobacter malonaticus LMG 23826: AFK66_017780
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Entry
AFK66_017780 CDS
T04062
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cmj
Cronobacter malonaticus LMG 23826
Brite
KEGG Orthology (KO) [BR:
cmj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmj03016
]
AFK66_017780 (truB)
Enzymes [BR:
cmj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AFK66_017780 (truB)
Transfer RNA biogenesis [BR:
cmj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AFK66_017780 (truB)
Prokaryotic type
AFK66_017780 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ALX80121
LinkDB
All DBs
Position
complement(3679618..3680562)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGLSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGTVVDERPVTFSEQQLQDALESFRGDTL
QVPTMFSALKYQGKPLYEYARQGIEVPREARPITVYELLFIRHEGDELELEVHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEQLNALLEEAQTREIAPSELLDPL
LMPMDSPAADYPVVNLPLTSSVYFKNGNPVRTTGAPPEGLVRVTEGETQKFLGMGEIDSE
GRVAPRRLVVEYPV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacgtgcatggcgtattgttgctggataagccg
caggggctctcctccaacgatgcgctgcaaaaagtaaagcgtatctataacgccaatcgc
gctggtcataccggcgcgctggatccgctggcgaccggcatgctgcccatctgcctcggt
gaagcgaccaagttttctcagtatctgctcgattcagacaagcgctatcgcgtgattgcg
cgtcttggccagcgtactgacacttccgatgctgacggtacggtggtggacgagcgcccg
gtcacgttcagtgagcagcaattacaggatgcgctggaaagtttccgtggcgacaccctg
caggtgccgaccatgttctcggcgctgaagtatcagggcaagccgctatatgaatatgcg
cgtcaggggattgaagtgccgcgtgaagcgcgcccgattaccgtttatgagctgctattt
attcgtcatgaaggcgatgagcttgagctggaagtgcactgttctaaaggcacctacatt
cgcaccatcattgatgatttgggcgagaaactcggctgcggcgcgcatgtgatttatctg
cgtcgtctggcagtaagtaaatatcctgtcgagcgtatggtaacgctggagcaactgaac
gcgctgcttgaagaagcacagacgcgtgagatcgcgccgtctgaactgctcgatccattg
ttaatgccaatggacagcccggcggcggattaccctgtggtgaacctgccgctgacctca
tccgtttactttaagaacggcaatccggtacgcaccacgggcgcgccgcctgaaggcctt
gttcgcgtgacggaaggtgaaacgcagaagtttcttggcatgggggaaatcgacagcgaa
gggcgcgtggcaccccgccgcctggtggtggagtatccggtttaa
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