KEGG   Cronobacter malonaticus LMG 23826: AFK66_018865
Entry
AFK66_018865      CDS       T04062                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
cmj  Cronobacter malonaticus LMG 23826
Pathway
cmj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cmj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AFK66_018865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmj03019]
    AFK66_018865
Enzymes [BR:cmj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AFK66_018865
Messenger RNA biogenesis [BR:cmj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AFK66_018865
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C CCDC138_C AAA_22
Other DBs
NCBI-ProteinID: ALX80310
LinkDB
Position
3899987..3901252
AA seq 421 aa
MSKTHLTEQKFSDFALHPVVVQALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAAENRQVNQPRALIMAPTRELAVQIHSDAEPLAEATGIKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYTKQNHVNLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPAAAERLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPVSKYNPDALLSELPPPKRLSRPRTGNGPRRSGAPRNRRRT
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacacttgactgaacagaagttttccgacttcgccctgcaccctgttgta
gttcaagcccttgagaaaaaagggttttataactgcacccctatccaggctctggcactc
ccgttaacgctcgcgggccgtgacgttgcagggcaggcgcaaaccggtaccggcaaaacg
atggcgtttttaacgtcaacgtttcactatttactctctcaccctgcggcggaaaatcgc
caggtgaatcaaccgcgcgccctgattatggcgcccacccgcgaactggcggtgcagatt
cactccgacgcagagccgctggctgaagccaccggcattaagcttggtctcgcctacggc
ggcgacggctacgacaaacaactgaaagtgctggaaagcggcgtcgatatcctgatcggc
accactggccgtcttatcgattacaccaaacaaaaccacgtgaacctgggcgctattcag
gttgtggtgctcgacgaagccgatcgcatgtacgatctgggctttattaaagacatccgc
tggctgttccgccgtatgccagccgccgcagagcgtctcaatatgctgttctccgccacg
ctttcttaccgcgtgcgcgaactggcgtttgagcagatgaacaacgcggaatatgtcgaa
gtcgagccggagcagaaaacgggccaccgtattaaagaagagcttttctatccgtctaac
gaagagaaaatgcgcctgctccagacgctgattgaagaagagtggccggatcgcgccatt
attttcgccaataccaaacaccgctgtgaagacatctggggccatctggcggcagacggt
catcgcgtcggcctgttgaccggcgacgtggcgcagaaaaaacgcctgcgtattctggat
gaatttacccgcggcgatctcgatatcctggtcgcaacggacgtcgcggcgcgcggcctg
catattcctgccgttacgcacgtctttaactacgacctgccggacgactgcgaagactat
gtgcatcgcatcggccgtaccggtcgtgcgggtgccagcggccactccatcagcctcgcc
tgtgaagagtacgcgctgaacttgccggcgattgaaacctatatcggccactccattccg
gtgagtaaatacaacccggatgcgctgttaagcgaactgccgccgccgaagcgcctgtcg
cgtccgcgtaccggcaatggcccgcgtcgttccggcgcgccgcgcaaccgtcgtcgtaca
ggataa

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