Cronobacter malonaticus LMG 23826: AFK66_022305
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Entry
AFK66_022305 CDS
T04062
Name
(GenBank) type IV secretion protein Rhs
Organism
cmj
Cronobacter malonaticus LMG 23826
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
OCRE
YL1_C
Motif
Other DBs
NCBI-ProteinID:
ALX78689
LinkDB
All DBs
Position
complement(2055678..2059805)
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AA seq
1375 aa
AA seq
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MHSGAHFDPQLGLDIHLYPWPLPTPHIGLVFDVFDYLPFIGTTVHVNGIRRASAGTGGIV
IHIPTGGAWVPPLRMPGGPQLDDELFMGSKTVAVDGEPFSRIGMPVLSCNIVGMMPPFRP
KRAAKPKLPSLTLPLTFNLALPNNVIVGGPPTVNLMALLMRAGLSGLGKGLKKLKATPQW
RLFMRRFAKFRQKLFRNMEPGFLKCRVLRAEPVDIRDGSVHLEHRDFLLPGRLPLDWGRF
YSSADIDQQGLCGFGWLTPADTTLEVLREEGVALLTQPEGVTLFAGLPEMPGREHAVFGL
PDGSRLWYEEQGGDRGWHVEQEGAFIWRFAGRDGLLKVTAIADRNHNRWQFERDGGQLTH
LCEYSAEGVTGREILVTCQHGRLQAMQLRIAQDGEVTPLTRYEYDDAGQLCAEIDALSHP
RRFHYRQRRMVSHIDRNGQGFHYAYDDAWRVVHAWGDGGVWDYHFEYHTLLNEVAVTDSL
GHVSRITFDENGLPVSEIDPLGGNTVFRYDDVGRTVEVTEPDGSQYRWEYDEQGRMTAEH
LPGGGVVRATFNDDGQPLCVTDESGAQWVSSYDAAGNLTEGRDPTGVSAHYVYDALGQLR
EADVPGRGLTRYDYDHYGFLAVIQEAGAGVTRLRHSPRGNLLDKRDASGGVTRYFWDRKD
RLVAMQTSGGQEIRVEYNREDEPVRYTDESGQETRFDYNATGMVTACHTPDGAQTGYEYD
PEDRLLAVINQNGERWALSRDALGRVETENDYWGQATRYLWDKGDRLISRLDPLGREVRY
GYDAAGRVREQRTGDTLTARYHYDDAGRLTLCENPWRRLAWRYDRAGRVLCEDQDGFQLR
YGYTARGLPAYRESDAGHRVGYDWNENDQLIGVQLNDDAPVVLRYDETGRLASEQLSPAI
RRAMQYDAQGRLAAQEVTRSDQPLFASGFAYDRTGNMTLRQDSQWGDDRYHYDPVGRLIA
HTEPDNRLRQFVQDAAGNHLHTRIQAVDDSPGGWFREGVHEGVRYVFDRAGELRQRRNLQ
IGEAKEDFLWDENRQLIAVRKGEHQVRYGYDALGRRVFKETPEETRWFYWQGDALAGETV
TRTAAPLAPLSLFDIGGRIKREQAQATLFHRMREYIYYPGTFRPLAFLTQEAGVRESWHY
HCDPNGAPVRITSVEGEIVWSERTGVWGEKGPVYASRIENPLRFQGQYFDPETGLHYNRY
RYYDPAIAAYISQDPIGMLGGGNPYRYAPNALIWIDPLGLIRGPVSLPDEPGIYIIHAGG
KSYVGSAGIKQQGMLSRVSSPEHAHAQRLLSQPDVKIQYVRVHLNDSLTESERNNILRYF
EQREFDKEVKRVGINNMLNDPHARIQAEGKRNYALSLISKNKVRASGRRTTCKKS
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgcactccggcgcccacttcgacccacagcttggcctggatattcatctgtatccgtgg
ccgctgccgacgccgcatatcggcctggtgttcgacgtgttcgactatctgccgtttatc
ggcacgacggtgcatgtgaatggcatccgccgcgccagcgccggaacgggcggcatcgtg
attcatattccgaccggcggggcgtgggtgccgccgctgcgtatgccgggcggcccgcag
cttgatgacgagctttttatgggcagtaaaaccgtggcggtggacggcgagccattctca
cgcatcggaatgccggtactgagctgcaatattgtcggcatgatgccgccgttccggcca
aagcgcgccgccaaacctaagctgccgtcgctgacgctgccgctcacgttcaacctggcg
ctgccgaataatgtcatcgtcggcgggccgccgaccgttaacctgatggcgctgctgatg
cgcgcgggcttaagcgggctcggcaaagggcttaaaaagctgaaggccacgccacagtgg
cggctctttatgcgtcgcttcgcgaagtttcgacagaaactctttcgcaatatggagccg
ggttttcttaaatgccgtgtactccgcgccgagccggtggatatccgcgacggcagcgtg
catctggaacatcgcgatttccttctgccggggcggctgccgcttgactgggggcgcttt
tactcctcggcggatatcgaccagcaagggctgtgcggcttcggctggctgacgcccgcc
gataccacgcttgaggtgctgcgcgaggaaggcgtggcactgctgacccagccggagggc
gtcacgctgttcgccggtctgcctgagatgccagggcgtgaacacgccgtttttggcctg
ccggacggcagccgactctggtatgaggagcagggcggcgatcgcggctggcacgtcgaa
caggagggcgcgtttatctggcgtttcgccgggcgcgacggcctgctcaaggtgacagcc
attgccgatcgcaaccacaatcgctggcagtttgagcgcgacggcgggcagctcacgcac
ctgtgcgaatacagcgctgaaggcgtcacgggccgcgagatcctcgtgacctgtcagcac
ggcaggcttcaggcgatgcagctgcgcatcgcgcaggacggcgaggtcacgccgctcacc
cgctatgagtatgacgacgcgggccagctctgcgcggagatagacgcgctgtctcatccc
cggcgttttcattaccggcaacggcgaatggtcagccacattgaccgcaacggtcagggg
tttcattacgcctatgacgacgcctggcgagtggtgcacgcgtggggcgacggcggcgtc
tgggattatcatttcgagtatcacacgctattaaatgaagtggcggtcaccgattcgctc
ggccatgtgtcgcgtattacctttgatgagaacggcctgcctgtgtcggagatcgaccct
ctcggcggcaacaccgtgttccgctatgacgatgtgggccgcacggtggaggtgacagag
ccggacggcagccagtaccgctgggagtatgacgagcaggggcgcatgacggcggagcat
ttgccgggcggcggcgtggtgcgcgccacctttaacgacgatggccagcccctgtgcgta
accgatgaaagcggggcgcagtgggtctcttcgtatgacgcggcgggcaacctcaccgaa
gggcgcgacccgacaggcgtttctgcgcattacgtttacgatgcgctcgggcagctgcgc
gaagccgacgtgccagggcgcgggcttacgcgctacgactatgaccattacgggtttctt
gcggtcattcaggaagccggtgcgggagtgacccggttgcgccattcgccgcgcggcaat
cttctcgacaaacgtgacgccagcggcggcgtgacccgctatttctgggacaggaaagac
cggcttgtcgcgatgcagacgtcaggcgggcaggagatccgcgtcgaatacaaccgtgaa
gatgagccggtgcgctacaccgatgaatcaggccaggaaacgcgatttgactacaacgcc
acggggatggtcacggcctgccacacgccggacggcgcgcagacgggctatgaatacgat
cctgaagaccgcctgctcgccgttatcaaccagaacggcgaacgctgggcgctgtcgcgt
gacgcgctgggccgcgtggagacggaaaacgactactggggacaggcgacgcgctacctg
tgggataaaggcgaccggctgataagccgcctcgatccgctggggcgcgaggtgcgctac
ggttacgacgccgcgggccgcgtgcgtgaacagcgcacaggcgacaccttgaccgcccgc
taccattatgacgacgccggccgcctgacgctgtgcgaaaacccgtggcggcggctcgcc
tggcgctatgatcgcgcaggccgcgtgttatgtgaggatcaggacggctttcagctccgc
tatggctacaccgcccgcggcctgccggcgtatcgcgagagcgacgccgggcatcgtgtg
ggttatgactggaatgaaaacgaccagttgatcggtgtgcagctaaacgacgacgcgccc
gttgtgctgcgttatgacgagacgggcaggctcgcgagcgagcagctttccccggccatc
cggcgcgcgatgcagtatgacgcgcagggaaggctggcggcgcaggaagtgacccggagc
gatcaaccgctgttcgcgagcggctttgcctacgatcgcaccggtaatatgacgctgcgc
caggacagccagtggggcgatgaccgttaccactacgatccggtcggccgtcttatcgca
catactgaacccgacaaccggctacgccagtttgtgcaggatgccgcaggcaatcatctg
cacacacgcattcaggcggtggatgactccccgggcggctggtttcgtgaaggcgttcac
gagggcgtgcgctacgtctttgaccgcgcaggcgaactgcgccagcgccgtaacctgcaa
atcggcgaggcgaaagaagatttcctgtgggatgagaaccgccagcttatcgcggtgcgc
aagggtgagcatcaggtgcgctacggctatgacgcgctcgggcggcgcgtgttcaaagag
acgccggaagagacgcgctggttttactggcagggcgacgcgctggctggcgaaacggtt
acgcgcacggccgcgccgctcgctcccttaagccttttcgacatcggcgggcgcatcaaa
cgcgagcaggcgcaggcaacactttttcatcggatgcgtgaatacatctactaccccggc
acgttccgcccgctggccttcctgacgcaggaggcaggcgtgcgcgaaagctggcactat
cactgcgatccgaacggcgcaccggtgcgcatcacgtcggttgaaggggagatagtctgg
tcagaacgcaccggggtatggggtgaaaaaggcccggtttacgccagccgcattgaaaac
ccgctgcgcttccagggccagtatttcgaccccgaaacgggtttacattacaaccgctat
cgctactatgatccggccatcgcggcctatatcagccaggacccgatagggatgctgggc
gggggaaatccttatcgctacgcacctaatgcgctgatatggattgatccgttgggtttg
attcgcggcccggtttccttacccgacgaacccggtatttatatcattcatgcaggcgga
aaatcttatgtaggttcggcaggcattaagcagcaaggcatgctttcacgtgtatcaagc
cctgaacacgctcacgcgcaaaggttactttctcaacctgatgttaagattcagtatgtc
cgtgttcacctcaatgattctctcactgaaagtgaaagaaataatattttacgatatttt
gaacagcgtgagtttgataaagaagtcaagcgggtaggtataaacaatatgcttaatgat
ccgcatgcgaggattcaggctgaaggaaaaagaaattatgcgctgtcattaatttcgaaa
aataaagttcgcgcttcaggcagacgtaccacttgtaaaaagagttag
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