KEGG   Callorhinchus milii (elephant shark): 103171628
Entry
103171628         CDS       T03088                                 
Symbol
fdft1
Name
(RefSeq) squalene synthase isoform X1
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk00100  Steroid biosynthesis
cmk01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    103171628 (fdft1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:cmk01006]
    103171628 (fdft1)
Enzymes [BR:cmk01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     103171628 (fdft1)
Prenyltransferases [BR:cmk01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   103171628 (fdft1)
SSDB
Motif
Pfam: SQS_PSY
Other DBs
NCBI-GeneID: 103171628
NCBI-ProteinID: XP_042201797
LinkDB
Position
Unknown
AA seq 380 aa
MSETLRTCYVYLNQTSRSFAAVIQALDGELRQAVCIFYLVLRALDTVEDDMTIPLDVKVL
LLQNFHTFLYQPDWRYCESQEKDRQVLEDFPSISKEFRNLAMVYQDVIANICHKMGVGMA
QFLEKKVNSLKDWDTYCHYVAGLVGIGLSRLFSASELEDQVVGQDTALANSMGLFLQKTN
IIRDYLEDQREGREFWPREVWSKYAETLSDLASPANLQTALQCMNDLITGALQHVPDVLK
YLSRLHNQSVFNFCAIPQVMAIATLAACYNNPHVFRGVVKIRKGQAVTLMMGATNIDAVK
RIMFQYSRAIGQKVPSTDVSAARTQQILSRIQTLSEAEGRLLSRSHLAPIYVSFAMFFAA
VSWQYWRMLSQEQDKYVPRQ
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgagtgagactcttcggacgtgttacgtttacctgaaccagacgagccgaagttttgcg
gctgttatacaggcgctggacggtgaacttcggcaggcagtgtgcatcttttacctggtg
ctgagagctctggacacggtggaggatgacatgacaattcccctggatgtgaaggtgctg
ctgctgcagaacttccacaccttcctgtaccagcccgactggaggtattgtgagagccaa
gaaaaggaccggcaggtgttggaggacttcccatcgatttcaaaggaattccgtaatctg
gccatggtgtaccaggatgtgattgcaaacatctgccacaagatgggagtgggaatggca
cagttcctggagaaaaaagtaaattccctgaaggattgggacacgtattgtcactatgtg
gcaggtctggtgggaatcggcctctctcgccttttctcagcttccgagctggaggaccag
gttgtaggtcaagacacagcgctcgccaactccatggggctgtttctgcagaaaacaaac
atcatccgagactacctggaggaccagcgagagggtcgggagttctggcccagagaggtg
tggagtaagtacgcagagacattgtcagatctggccagccctgcaaacctccagactgcc
ctgcagtgtatgaacgatctgatcaccggtgcactgcagcacgttcctgatgtcctcaaa
tacctctcacgcctccacaaccagagtgtcttcaacttctgtgccatcccacaggtgatg
gctattgccactctggctgcctgttacaataacccacatgtgttccgaggtgtggtgaag
atcaggaaaggccaggctgttactctgatgatgggggcgaccaatatcgatgctgtcaaa
aggatcatgttccagtattcccgagcaattggacagaaggtacccagtactgatgtctcg
gcggctagaacacagcaaatcttgagcaggatccagactctgagcgaggctgaaggtcga
ctcctctcacgcagccacctggcgcccatctacgtctccttcgccatgttttttgccgct
gtcagctggcagtactggcggatgctgtcccaggagcaggacaagtatgtgccgagacaa
tga

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