Callorhinchus milii (elephant shark): 103172022
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Entry
103172022 CDS
T03088
Symbol
colgalt1b
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk00310
Lysine degradation
cmk00514
Other types of O-glycan biosynthesis
cmk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
103172022 (colgalt1b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
103172022 (colgalt1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cmk01003
]
103172022 (colgalt1b)
Enzymes [BR:
cmk01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
103172022 (colgalt1b)
Glycosyltransferases [BR:
cmk01003
]
O-Glycan biosynthesis
O-linked Gal type
103172022 (colgalt1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Aminotran_4
Motif
Other DBs
NCBI-GeneID:
103172022
NCBI-ProteinID:
XP_042200622
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MASAPRPRPRPLAPLLVALTAAAAAYFAEERWAPESPLLRPRVMVALIARNSAHSLPLSL
GALERLRYPPASLGLWVATDHNVDNTTAVLREWLVNVQKLYHSVEWRPMDEPRSYYDETG
PKHWSNARYEHVMKLRQAALKTARERWADYILFVDADNVLTNVDTLNLLIAENKTVIAPM
LDSRSAYSNFWCGMTSEGYYKRTPAYVPMRKRERIGVFPVVMAHSTLLIDLRKEASQNLA
FYPPHPDYTWAFDDIIVFAYSCRRAGVQMYLSNKEHFGFLQVPVKPLSTMQDDVESFTHV
QLEAMINHPPMMPSKYVYLAPKHPDKMGFDEVFLINLKRRADRRAQMLRTLYEQEIACKI
VDAVDGRALNSSQVQGLGIVMMSDYEDPYSGRPLTKGELGCFLSHHKVWKEVVMRGLQRS
VVFEDDLRFEIFFKRRLIYLMKEVEEAGLDWDLIYIGRKRMQVDHPEKPVPGVRNMVEAD
YSYWTLGYVISLQGAKKLINANPFSKLLPVDEFLPVMYNKHPTAKYMKHFETRDLKAFSV
EPLLIFPTHYTGDPGYVSDTETSTEWDNENRKTDWDRAKSQKMREQATISNAAQNLGPSH
PSLSPSHPSLSPTHPPLDTSHPPLDTSHPPLDTSHPPLDASSRDEL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggctcctcggccccgaccccgacccctcgcgccgctgctcgtggcgctgacc
gccgccgccgccgcctacttcgccgaggagcgctgggcgcccgagtccccgctgctcagg
ccgcgggtgatggtggccctgatcgcccgcaactcggctcacagcctcccgctcagcctc
ggagccctcgagcggctccgctacccgcccgccagcctcggcctgtgggtagcgactgac
cacaatgtagacaataccactgcggtgctgagggaatggctggtgaacgtacagaaactg
taccattcagtggagtggcggcccatggatgagcccagatcctactatgacgaaaccgga
cccaaacactggtcgaatgcccgctatgaacatgttatgaagctacgccaagcggcattg
aaaactgcgcgagagcgatgggccgactacatcctgtttgtggatgccgataacgtactg
actaacgtggacaccctgaacctgctcatcgctgagaacaagactgtgatcgctccaatg
ctggactcccgctcggcctattcaaacttctggtgtgggatgacctctgagggttactat
aagcggaccccagcgtacgtgcccatgcggaagcgagagcgaattggtgtgttcccggtg
gtgatggctcactctacgctgctcattgacctgaggaaggaagcctcgcagaacctggct
ttctacccgccacaccccgactacacctgggccttcgacgacatcatcgtattcgcttac
tcctgcagacgggcaggagtgcagatgtacctgagtaacaaggaacacttcgggttcctc
caggttccggtgaagcctctgagcacaatgcaggacgacgtggagagctttactcacgtt
cagttggaggcaatgataaatcaccctccgatgatgccttcaaagtacgtatatttggct
ccaaagcaccctgacaagatgggctttgatgaggtctttctgattaacctgaagcgccgg
gcggaccggagggcacagatgcttcgtacactatacgagcaggagatcgcgtgtaaaatc
gtggatgctgttgatggccgggcgctgaactccagccaggtccagggtctgggtatcgtt
atgatgtcggattacgaggacccgtactcggggcgacccctgaccaagggggagctgggc
tgtttcctcagtcaccacaaggtgtggaaggaggttgtcatgcgaggcttacagaggtca
gtggtctttgaggatgacttgaggtttgagatcttcttcaagcggaggttgatatacctg
atgaaagaggtggaggaggctggtctggactgggatctgatttatattggtcggaagcgg
atgcaggtggatcatccggaaaagcctgtgcctggggtgaggaacatggtggaggccgac
tattcctactggactctgggctatgtcatctccctgcaaggagcgaagaaactcatcaat
gccaaccccttctccaagctgctgcctgtggacgagtttctgcctgtcatgtacaataaa
catccgacagccaagtacatgaagcattttgagacacgggacctcaaggccttctctgtg
gagccgctgctgatcttccccacacactacacaggggacccgggttacgtgagcgacacc
gagacctccaccgagtgggacaacgagaaccgcaagaccgactgggaccgggccaagtca
cagaagatgagggaacaggcgaccattagcaacgctgcccagaacctgggcccctctcac
ccctccctgagcccctctcacccctccctgagccccactcatccccccctggacacctct
catcccccactggacacctctcatcccccactggacacctctcatcccccactggatgcc
tcgtccagagacgagttgtga
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