Callorhinchus milii (elephant shark): 103172928
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Entry
103172928 CDS
T03088
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04137
Mitophagy - animal
cmk04140
Autophagy - animal
cmk04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103172928
04137 Mitophagy - animal
103172928
04148 Efferocytosis
103172928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmk03000
]
103172928
Transcription factors [BR:
cmk03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
103172928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
bHLH_HIF1A
PAS_3
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
103172928
NCBI-ProteinID:
XP_042201200
LinkDB
All DBs
Position
Unknown
AA seq
333 aa
AA seq
DB search
MIREADEESPSTDQRRERSRDAARCRRGKETQMFLELARQLPLPRRLSSQLDKATIMRLT
LSFLRLRTLISSGDSGGSAQDTDGQQLTALDGFFMVLSQSGDIVFLCENVSKYLGLTQLE
LIGQSIFDCTHPCDHEEMRSILRNRHVPETCGRRRCVQCDFLVRVKCTLTDEGKTVNVRS
ASWKVLRCSGVVRTPQTETTDEGTPSQVCLLLICEPVPLPPVAEPLTNTWSFLTCHSLDM
RFTRLDQRAEELTGYEEGELVGRSVYELLHGLDCNHIQHRHHSLFSQGQTSTGRYRLLLK
HGGFIWIETDAAIIYSHQSSHPQYVMCVNYVLR
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgatcagagaggcagacgaggaaagtcccagcacagaccagcgccgggaaaggtccagg
gacgcagccagatgtcgtcggggcaaagagacccagatgttcctcgaactggcccgtcaa
ctgcccctcccccgcaggctcagctcccaactggacaaggccaccataatgcgactgacc
ctcagcttcctacgtctaaggaccctcatctcctcgggagactcggggggttctgcccag
gacacagatggacagcagttgaccgccttagatggcttcttcatggtgttgtcccagagt
ggagacatcgtgttcctgtgtgagaacgtcagcaagtatctgggtctgacacagttggag
ctaatcggacaaagcattttcgactgcactcacccctgcgaccacgaggagatgcgcagt
atccttcggaacagacacgttcctgagacgtgcggacgtcgtcgctgtgtgcaatgcgat
ttcctcgtacgggtcaagtgtacgctgaccgacgagggaaagacggtgaacgtgaggtca
gcttcctggaaggtcttgcgctgttccggtgtcgtgaggacccctcagaccgagaccaca
gacgaggggaccccgtcccaggtctgtctgcttctgatctgtgaacccgtccctctccct
cccgtcgcagagccactgacgaacacctggagcttcctcacgtgccacagcttggacatg
agattcacccgtctggaccagagagccgaggagctgacgggctatgaggagggagagttg
gtgggacgctcggtgtatgagttgctccacggcctggactgcaaccacatccaacaccgt
caccacagccttttctcgcagggccagacctcgacaggacggtaccggctgctgctcaaa
cacggggggtttatctggatagagactgacgccgccatcatctacagccatcagagctca
cacccacagtacgtcatgtgtgtcaactacgtcctgaggtaa
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integrated database retrieval system
