KEGG   Callorhinchus milii (elephant shark): 103173200
Entry
103173200         CDS       T03088                                 
Name
(RefSeq) TATA-box-binding protein isoform X1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103173200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cmk03000]
    103173200
   03021 Transcription machinery [BR:cmk03021]
    103173200
Transcription factors [BR:cmk03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    103173200
Transcription machinery [BR:cmk03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     103173200
  RNA polymerase III system
    TFIIIB
     103173200
  RNA polymerase I system
    SL1/TIF-1B
     103173200
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-GeneID: 103173200
NCBI-ProteinID: XP_042189671
UniProt: V9KUP6
LinkDB
Position
Unknown
AA seq 301 aa
MEQSNNGLPPYAQGLSSPQGAVTPGINIFSPMMPYGTGLTPQPVQSSNSLPLLEEQQRQQ
QAAQQSTTSQPSTQVSSSQPPQLFHSQTTTTTTLPGNTPFYPSPMTPMTPITPATPASES
SGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGK
MVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQ
QFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKT
T
NT seq 906 nt   +upstreamnt  +downstreamnt
atggagcagtctaacaatggcttacccccgtacgcccaggggctgtcgtcgccgcagggt
gccgtgacgccaggaataaacattttcagtcccatgatgccatatggcactggcttgact
ccacaaccagttcagagctccaatagtttgccacttttggaagaacaacaaagacaacaa
caagcagcacaacagtctacaacatctcaaccatcaacacaagtgtcctccagccagcca
ccacagctctttcactcacagacgaccaccacaaccactttaccaggcaacacgcctttt
tatccatcaccaatgacacctatgacaccaataaccccagctactcccgcttctgagagt
tcaggaattgtgccacaactacagaatatagtgtccacagttaatctgggctgtaaactg
gacttgaagacaattgcccttcgagccagaaatgctgaatataatccaaagcgttttgct
gctgtcatcatgagaatccgagagcctcgtacaactgctcttattttcagctctggaaaa
atggtgtgcactggtgcaaagagtgaagaacaatcacggttagctgcgaggaagtatgcc
agagttgtccagaaattaggattcccagctaaatttctggattttaagattcagaacatg
gtgggcagctgtgatgtgaagtttcctattcggctggagggcctggtgcttactcatcag
caattcagcagttacgagccagagttatttcctggattaatctaccgaatgatcaaacca
agaattgtgttgctaatatttgtgtctggaaaagttgtattaactggtgcaaaagtacgt
gcagaaatctatgaagcatttgaaaacatctatccaattttaaaaggtttcagaaagact
acataa

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