Callorhinchus milii (elephant shark): 103175034
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Entry
103175034 CDS
T03088
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103175034 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103175034 (cstf3)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
103175034 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
NRDE-2
TPR_6
Motif
Other DBs
NCBI-GeneID:
103175034
NCBI-ProteinID:
XP_007885954
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MSGDGSSEQAPEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVTQ
FPSSGRFWKLYIEAENCNLRPHSTPAHEESVLQSKIKAKNYDKVEKLFQRCLMKVLHIDL
WKCYLAYVRETKGKLPSYKEKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYA
ENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGINVHLAKKMIEDRSRDYMNARRVA
KEYETVMKGLDRNAPSVPPQNSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAY
EQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLRKNM
LLYFAYADYEESRMKYEKVHSIYNRLLTIEDIDPTLVYIQYMKFARRAEGIKSGRSIFKK
AREDARTRHHVYVSAALMEYYCSKDKAVAFKIFELGLKKYGDIPEYILAYIDYLSHLNED
NNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFAAFKEEYEGKE
TALLVDRYKFMDLFPCSNSELKALGYKDVSRAKVTAMIPDPVVAPSIVPVMKDEVDRKPE
YPKPDTNQMIPFQPRHLAPPGLHPVPGGVFPVPPTSVLLMKLLPPPTCFQGPFVQVDELI
EVLRRCQLPETVEQAVELITGSQPESIVEGNGPLENDAVMKKSLKRAANEDSDDDEEKGT
VAPPVHDIYRARQQKRVR
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgacggcagttcggagcaggctccagaatatgttcctgagaaggtgaagaag
gcggaaaagaaattagaagaaaatccatatgaccttgatgcttggagcattctcatacga
gaggcacagaatcaacccatagacaaagcgcggaagacctatgagcggcttgtcacccag
ttcccaagctctggcagattctggaaactatacattgaagccgagaactgcaacctcagg
ccacatagtactcctgctcatgaggagtccgttttacagtcaaagataaaagcaaaaaac
tatgacaaggtagaaaagttgtttcagcgatgtcttatgaaggttttgcatattgatcta
tggaaatgttacctggcctatgtacgggagactaaaggcaaacttcccagttacaaagag
aagatggctcaggcgtatgactttgcgttggataagattggcatggagatcatgtcctac
caaatttgggttgattacataaactttttgaaaggagtagaagcagtggggtcctacgcg
gagaaccaaaggattacagccgtccggcgagtatatcagcgaggctgtgtcaatccgatg
ataaatattgaacagttatggagagattataataaatatgaagagggtattaatgttcac
ctggccaagaaaatgattgaggatcggagccgagattatatgaatgctcgacgggtggca
aaggagtatgagacagtcatgaaaggtctagatcgcaacgcaccatcagtgccgccacag
aacagcccacaagaagcacaacaggttgaaatgtggaaaaaatatatccagtgggaaaaa
agcaacccactaagaacagaggaccaaacgctaatcactaaaagagtcatgtttgcttat
gaacaatgtttgctagttttgggacatcatcctgacatttggtatgaagctgcccagtac
ttggagcaatctagcaaactgctcgctgaaaagggggatatgaacaacgcaaagctgttc
agtgacgaggctgctaacatatacgagagggctatcagcactttgttaaggaagaacatg
ctgctttactttgcctatgcagactatgaagagagtcgaatgaagtatgaaaaggtgcac
agcatatacaataggctcttaactattgaagatatcgatcccacgttggtgtacatccag
tacatgaaatttgcacggagagcagaaggcatcaagtctggtcgatccatttttaagaaa
gccagagaagatgctagaacacgccaccatgtctacgtatctgctgcgctcatggagtac
tactgcagtaaagacaaggcagtcgccttcaagattttcgagctggggttgaagaagtat
ggggacattccagagtacatattggcttatattgactatctttctcatcttaacgaggat
aataataccagagttttgtttgaacgtgtgttgacgtcaggatctctaccacctgagaaa
tctggagaaatctgggcacgatttctagccttcgagagtaatattggcgatctcgccagt
atcctgaaagtggaaaagaggaggtttgctgcttttaaggaggaatatgaagggaaagaa
acggctttgctggtggacaggtacaagttcatggacctgtttccatgttcaaacagtgaa
ctgaaagcccttggatataaggacgtttcccgtgccaaagtaaccgccatgattccagat
cctgtcgtggctccttctattgtgccagtgatgaaggatgaagtggatcgaaaaccggaa
tatcctaaacccgacactaatcagatgataccatttcagcctagacatttagctcctccg
ggtctccatcctgtccctggtggagtgtttcctgtacccccgacctcagtactacttatg
aagctgttaccaccgccaacatgtttccaggggccatttgtccaagttgatgaactcatt
gaggttttgagacgttgccagttaccagaaactgttgagcaagctgtggagctgatcacc
ggtagtcagccagaaagcatagttgaaggaaacgggcctttagaaaacgatgcagtgatg
aaaaagtcattaaaaagggcagcaaacgaagattctgatgatgacgaggaaaaaggaact
gtagccccccctgtacatgatatctacagagcacgtcagcagaagcgagtccggtaa
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