Callorhinchus milii (elephant shark): 103175094
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Entry
103175094 CDS
T03088
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
103175094 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmk04121
]
103175094 (rag1)
Enzymes [BR:
cmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103175094 (rag1)
Ubiquitin system [BR:
cmk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103175094 (rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
103175094
NCBI-ProteinID:
XP_007886047
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MVQLHQLMLFSSKQLVEILAGVSMQHDRLLNATMSHRCQHLKQMEMPLCNMPERTRCTET
APFRKIEWEDKISKAIHNATEPLVTMAAHSMQFKLSPSQTQTMETLPLETLPLDKKTLED
KPQYNRFVQKSKPLEYTPTKTQLPESKQVKSKSLEEHKLHLQNLCRICGGSFNTSRYDMK
YAVSGPVDDVTQDVLRKMGHGDCFWPELVHNTFKVDVRRDMETVHPTHFCHSCWRIAIQM
INNTNNEDAFFPINKFMHWKPHSNHCRVCNSSKGIRKRKGLGRSPQVPKKAKVAIDLPIR
PKVVNRRDQMNSTSIMLAKKVVNCKKLHLSPKLLVDDYPHHFLQSVSCQVCDHLLADPVQ
LPCMHLACRTCIFKCFAVLGKYCPVCRFPCCSAELTSPVKSFSHVLNSLVVKCPMADCKD
EMRLDEYSHHAQTHKETRGKYDYSPTNKGGRPRLHLLSLTRRAQKHRLRDLKHHVKAFAE
KEEGGDVKSVCLTLFLLALRAANEHRQADELEAIMQGRGSGLLPAVCLAIRVNTFLSCSQ
YHKMYRTVKATTGKQIFQPLHSLRTTEKTLLPGYFPFEWQPPLENVSTNTEVGIIDGLSC
WPQCIDDYPMDTISRRFRYDVALAATIKDLEEDILQGLKSHGMDEFQSGPFTVVVKECCD
GMGDVSEKHGCGPIVPEKAVRYSFTIMSVSVTGENNENVKVFEELKPNSELCCKPLCLML
ADESDHETLTAVLGPLIAERKAMKASHLILEIGDLLRSFRFIFRGTGYDEKLVREVEGLE
ASGSIYVCTLCDSTRSEASVNLTCHSITRSHTENHERYEIWRSNPYRESPEVLRDRVKGI
SAKPFIETQPSIDALHCDIGNATEFFKLFQDEIGELHIKPNPSKEDRKRWQVLLDQHLRK
KMNLKPIMRMNGNFARKLMTKETVEVVCELIPSEERREILRELMSLYVLMKPVWRTTFPI
KEYPDLVHQYSFNSQKFADLLATKFKHRYEGKITNYLHKTLAHVPEIIERDGSIGAWASE
GNESGNKLFRRFRKMNARQSKSYELEDILKHHWLYTSKYLQRFMNQHNELKQSVFASTPF
DSSSQNDSPPEPHDSIDF
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctgcatcagctaatgcttttctcttccaagcagcttgttgaaatccttgct
ggtgttagtatgcaacatgacaggctcctaaatgccacaatgagtcacaggtgtcagcat
ttgaaacaaatggagatgccattgtgcaacatgcctgaaaggacgaggtgcacagagact
gcgcctttcagaaaaatcgaatgggaagacaaaatttcaaaggcaatacataatgccacg
gaacctttagttaccatggctgcccatagcatgcagtttaaactttctccatctcaaacc
cagacaatggagaccttacctttggagacattgcctctggacaagaagactttggaagat
aagccacaatacaacaggtttgttcagaaaagcaaacctttggagtacacgccaacgaaa
actcagcttcctgaatccaagcaagtgaaatccaaatctttagaagaacacaaattgcat
ttgcagaatctctgccgcatttgcggaggttcctttaacaccagccgctatgacatgaag
tatgcagtcagtggcccagtcgatgacgtcacccaagatgttcttaggaaaatgggacat
ggggattgcttttggcctgagctcgtccataacaccttcaaagtagatgtcaggagagat
atggagaccgttcaccccacccacttctgccacagctgctggcgcattgcaattcagatg
atcaacaatacaaacaatgaagatgcattttttcccatcaataaatttatgcactggaag
cctcattccaaccactgtagagtttgcaactcttcaaaaggaattcgcaagagaaagggt
ctgggaagaagtccgcaggtccccaaaaaagcaaaggttgccatcgaccttccgatcaga
ccaaaggttgttaatagaagagatcagatgaacagcacaagcattatgttggctaaaaaa
gtggtcaactgcaagaagctccatctaagtccaaagctccttgtggatgactatccccac
cactttctccagtcggtctcatgtcaggtttgtgaccatctacttgctgaccctgtgcaa
ttaccatgcatgcatctggcctgcagaacatgcattttcaaatgctttgcagttctcgga
aagtattgcccagtttgcaggtttccttgttgttcggcagagctcacaagccctgtcaaa
tctttcagtcacgttctgaattcccttgtggtgaaatgcccaatggcagactgcaaagat
gagatgagactagatgaatattctcaccatgcccaaactcacaaagagaccagagggaaa
tatgattactcaccaacaaacaagggtggtcggccaaggttacacttgttgtctttaaca
cgaagagctcaaaagcatcgcctgcgagatctcaagcatcatgttaaagcttttgcagag
aaagaagagggtggagacgtgaagtcggtttgtctcactctgtttctacttgcgctgaga
gctgcaaacgaacacaggcaggcagacgagctagaggctataatgcagggaagaggatca
gggttgctacctgcagtctgtcttgccattagagtcaacacattcttgagttgcagtcaa
taccataaaatgtacagaacagtcaaagcaacaactgggaagcagatcttccagccattg
cattcactccgaactacagagaaaactctgttgcctggttattttccatttgaatggcaa
cctccactagaaaatgtctctactaacactgaagtaggaataatagatggtttgagttgt
tggccccagtgcattgatgattatccgatggacacaatttcccgacggtttaggtacgat
gtagcacttgctgcaactatcaaagatcttgaagaagacatcttgcaaggtctgaaatca
cacggaatggatgagtttcagagtgggccattcactgttgtggtaaaggagtgttgcgat
ggaatgggggacgtcagcgaaaagcacggatgcggtccaattgtcccagaaaaggcagtg
aggtattccttcacaataatgagtgtgagcgtcacgggtgaaaacaatgaaaatgtcaag
gtatttgaagaattgaagccaaattctgaattgtgctgcaaacctctttgcctcatgttg
gcagatgaatctgaccatgaaaccctgacagcagtgctgggcccactcatcgccgaaagg
aaagccatgaaggcaagtcatttaatccttgaaattggcgatttgctcaggtcttttcga
ttcatcttccgaggcacagggtatgatgagaagcttgtgcgtgaagtggaaggccttgag
gcctcaggctccatctatgtttgcacattatgtgactccactcgtagtgaggcctcagtg
aatttgacctgccattccataaccaggagccacacagaaaaccatgagcgctatgaaatt
tggcgatcaaacccatatcgcgagtcccctgaagtcctccgcgatagagtgaaaggcatc
tcagccaagccttttattgaaactcagccctccattgatgccttgcattgcgatattgga
aacgcaacggaattcttcaagctcttccaagatgagattggggagcttcacatcaagccc
aacccgtccaaagaggataggaaaaggtggcaagtactgctcgatcagcatttgagaaag
aagatgaatctgaagcctatcatgaggatgaatggaaactttgccaggaaactgatgacc
aaagagaccgtagaagtagtatgtgaattaattccgtctgaggagaggcgagaaattctc
agagagctaatgtcactttacgtcctgatgaaaccagtgtggcgcaccacgtttcctatc
aaggagtacccagaccttgtgcaccaatacagctttaattcccaaaagtttgcagacctg
ctcgctacaaagttcaagcacagatatgaagggaagatcacaaattacctgcacaaaact
ttggcccacgttcctgagatcatcgaacgagatggttccataggagcttgggcgagtgaa
ggaaatgaatcgggcaacaagcttttccgacgttttaggaaaatgaatgcgaggcagtct
aaaagttatgagctggaagatatcctgaagcaccactggctgtacacttccaaatatttg
cagaggttcatgaatcaacacaatgaactgaaacaatcagtgtttgcttccacaccattt
gacagcagcagccaaaatgattcaccaccagagccacatgactccattgatttttaa
DBGET
integrated database retrieval system
