Callorhinchus milii (elephant shark): 103175149
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Entry
103175149 CDS
T03088
Symbol
ubr5
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UBR5
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103175149 (ubr5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmk04121
]
103175149 (ubr5)
Enzymes [BR:
cmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
103175149 (ubr5)
Ubiquitin system [BR:
cmk04121
]
Ubiquitin ligases (E3)
HECT type E3
103175149 (ubr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
103175149
NCBI-ProteinID:
XP_007886144
UniProt:
A0A4W3H048
LinkDB
All DBs
Position
Unknown
AA seq
2794 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKFNLSSHPPLNVLEQATIKQCVVGPNHAAF
LLEDGRICRISFAVQPDRLELGKPDTTDGSKLSSGSGTGRTSRPGRSSDSPWFLSGSDTL
GRLAGNPLGSRWSSGVSGGASGRSSTGARDSRRQTRVIRTGRDRGSGLLGSQPQPVIPAS
VIPEELISQAQVVLQGKSRSVIIRELQRTNLDVNLAVNNLLSRDDEDGDDGDDTASESYL
PGEDLMSLLDADIHSAHPSVIIDADAMFSEDISYFGYPSFRRSSLSRLGSSRVLLLPLER
DSDLLRERESVLRLRERRWLDGSSFDNERGSTSREGESSLDKKSLPVQSPVSLGEELQWW
PDRDGTKFIAIGALYSELVAISSKGELYQWKWNESEPYRNAQNPIVHHPRATQLGLTSEK
IVLLAANSIRATVATESNKVATWVDETLCSVASKLEHSVQVFTELQGERIVSLHCCALYT
CAQLENNLYWWGVVPFSQRKKMLEKARAKNKKPKSSAGISSIPNITVGTQVCLRNNPLYH
SGAVAFSISAGIPKVGVLMESVWNMNDSCRFQLRSPESLKSLEKLSKSTESKTENKPESV
KTEMGPPPSPASTCSDASSIASSASLPYKRRRSTPAPKEEEKVNEEQWPLREVVFVEDVK
NVPVGKVLKVDGAYVAVKFPGTSTNVNNQSCTTTDADPTSLLQDCRLLRIDELQVVKTGG
TPKVPDCFQRTPKKLSIPEKAEILAVNVDSKGVHTVLKTGNWVRYCIFDLATGKAEQENN
FPTSSIAFLGQNERNVAIYTAGQESPIVLRDGNGTIYPMAKDCMGGIRDPDWLDLPPITS
LGMGIHSLTNLPANSSIKKKAAVIVMTVEKQALMQHILRCDYEASRQYLMNLEQAVLLEQ
TPQALKMFLNNRCDGNRNVLHACVSVCFPTSNKETKEEEEAERSERNTFAERLSAVEAIA
NAISVVSSNNSGNRTGPSSSRSLRLREMMRRSLRAAGLGRHESGASSTDHQDPVSPPIAP
LSWAPDPPAIDPDGDIDFILAPAVGSLTTAASGTGQGPSTSTIPGPSADPPVVESKDRKA
NAHLILKLLCESVVLRPYLRELLSAKDARGMTPFMLGVGGRAYPAAITILETAQKIAKGD
VSGEKEEDVFMSMICPPGTNPDDSPLYVLCCNDTCSFTWTGAEHINQDIFECRTCGLLES
LCCCTECARVCHKGHDCKLKRTSPTAYCDCWEKCKCKTLIAGQKSARLDLLYRLLTTTNL
VTLPNSRGEHLLLFLVQTVARQTVEHCQYRPPRIREDRNRKTANVEDSDMPDHDLEPPRF
AQLALERVLQDWNALKSMIMFGSQESKDPLSASSRIAHLLPEEQVYLSQQSGTIRLDCFT
HCLIVKCTADILLLDTLLGTLVKELQNKYTPGRREEAITVTMRFLRSVARVFVILSVEMA
SSKKKNNFVPQPIGKCKRVFQALLPYAVEELCNVAESLIVPVRMGIARPTAPFTLASTSL
DAMQGSEELFSVEPLPPRQSSDQSSSSSQSQSSYIIRNPQQRRISQSQPVRGRDEEQDDI
VTADVEEVEVVEGVAGEEDHHDEQEEQGEENTEAEGQHDEHDDDGSDMELDLLAAAETES
DSESNHSNQDNASGRRSVVTAATAGSEAGASSVPAFFSEDDSQSNDSSDSDSSSSQSDDE
EQDTFLQDEPLERTTNSSHANSAAQAPRSMQWAVRSTQNQRSTNTTPSSTSAPAGGSAGL
IYIDPSTLRRSATISTSAAAAAAALEASNSSSYLTSASSLARAYSIVIRQISDLMGLXPK
YNHLVYSQIPAALKITYQDAINLQNYVEEKLMPTWNWMVSIMDSTEAQLRYGSALSSAGD
PGHPSHPLHASQNSARRERLTAREEASLRTLEGRRRATLLNARQGMMSARGDFLNYALSL
MRSHNDEHSDVLPVLDVCSLKHVAYVFQALIYWIKAMNQQTTLDTPQLERKRTRELLELG
LDNEDSEHENDDDTNQSAGLHDKDDELLSTEAGQNHPFFRRSDSMTFLGCIPPNPFEVSL
AEAIPLADQPHLLQPNARKEDLFGRPSQGLYSSSSGLGKGVTEVTVDRNCLEVLPTKMSY
SSNLKNVMSMQNRQRKTTDEQVLPEDESENSRIGPSAQDLAAQLKSSLLAEIGLTESEGP
PLTSFRPQCSFMGMVISHDMLLGRWRLSLELFGRVFMEDVGAEPGSILTELGGFEVKESK
FRREMEKLRNAQSRDLTLEVDRDRDLLIQQTMRQLNNHFGRRCTTTPMTVHRVKVTFKDE
PGEGSGVARSFYTAIAQAFLSSDKLPNLDCVQNASKGLQTSLMQRLRNRERERERERERE
MRRSGGMRAGSRRERDRESRRQLSIDTRPFRPASEGNPSDDPDPLPAHRQALGERLYPRV
QAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAMELIIAHGRENGADSILDLG
LLDSTEKTQQDTRKRHGSSRSVVDMELDEPDDGDDNAPLFYQPGKRGFYSPMPGKNTEAR
LNCFRNIGRILGLCLLQNELCPITLNRHVIKVLLGRKVNWHDFAFFDHVMYESLRQLILA
SQSQDAYAVFAAMDLAFAIDLCKEEGGGQVELVPGGANIPVTPLNVYEYVRKYAEYRMLV
VAEQPLHAMRKGLLDVLPKNSLEDLTAEDFRLLVNGCGEVNVQMLISYTSFNDESGENAE
KLLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDDQHLPTA
NTCISRLYVPLYSSKQILKQKLLLAIKTKNFGFV
NT seq
8385 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccattcacttcgtggtgcacccgttaccggggaccgaggatcagctgaacgac
agattacgggaagtatcagaaaaactcaacaaattcaacttaagcagtcatccacctctg
aatgttttggagcaagctacaattaagcagtgtgtggtgggaccaaaccatgcagcgttt
ctcctagaggatggtcgtatatgtagaattagttttgctgttcaaccagacaggctagag
ttgggaaaacctgacaccactgatggttcaaagttgagcagtggttcagggacaggaagg
acttccaggccaggcaggagtagtgattccccatggtttctgtctggttctgatactctg
ggcagactggcaggcaacccccttgggagtcggtggagttctggagtgagtggtggggca
tcaggacgatcatcaaccggagcgagagattcaagaagacagaccagagtcattcgaact
ggtcgtgatcgaggatccggactgttgggaagccagccacagcctgttattccagcgtca
gtcattccagaggaacttatatctcaggcacaagtggtattgcaaggcaagtctagaagt
gttattatccgagaactacaacgtactaacttggatgtcaatcttgctgtaaacaactta
cttagtcgggatgatgaagatggagatgatggtgatgacacagcaagtgaatcctatttg
cccggagaggatcttatgtcattgctggatgctgacatacattctgcacatccaagtgtc
atcatagatgctgatgctatgttttctgaagacatcagctattttggttatccttccttc
cgtcgttcttccctctccagactaggctcatcaagagttctccttcttcccttagagaga
gactccgatctgttgcgtgaacgtgagtcagttttacgtttacgtgaaaggaggtggctt
gatggttcctcatttgataatgaacgcggctccacaagccgagaaggcgaatcaagtttg
gataagaaaagccttccagtccaaagccctgtttccctgggagaagaattgcagtggtgg
cctgaccgagatggtactaagtttatagctattggagcgctatactctgagttggtggca
ataagcagtaaaggtgaattgtatcaatggaagtggaatgaatctgagccatacaggaac
gcacagaatccaattgtgcatcatcctcgagccacgcagttaggtttaaccagcgagaag
attgtcctcttggctgcaaacagcatcagagctacagttgctacagagagcaacaaagtt
gccacatgggtggatgaaactttatgctctgtcgcttctaaattggaacacagtgtgcaa
gtttttaccgagttacagggagaaagaattgtatccctacattgttgtgctctctacact
tgtgcacagctggagaataacctgtattggtggggagtagttcctttcagtcagcggaag
aagatgctcgagaaggccagagccaaaaacaaaaagccaaagtctagtgcaggaatttcg
tcaatacccaacatcacagtcggaacacaggtgtgtttgagaaataatccactttaccac
tctggagctgtagctttttccatcagtgctggcattccaaaagtcggtgtactgatggaa
tcagtttggaacatgaatgacagttgtcgattccagctgcgatcaccggaaagtttgaaa
agcttagaaaagttgtccaaaagtactgaaagcaagacagagaataaaccagaatctgtg
aagactgaaatgggtcctcctccttccccagcatccacttgcagtgatgcatcctctatc
gcaagcagtgcatcactaccctacaagcgtagacgttccactccagctccaaaagaggaa
gagaaagtgaatgaagagcaatggccactgcgagaagtggtatttgttgaagatgttaaa
aatgtaccagtgggaaaggtattgaaagtagatggtgcctacgttgctgtgaaattccct
gggacttccaccaacgtcaataatcagagttgcactaccacagatgctgacccaacatct
cttctacaagactgtaggctactacgcattgatgagcttcaagtggtgaaaacgggcggg
acgccaaaagttccagattgcttccagcgaactcctaaaaagctttctattccagaaaag
gctgagattcttgctgtgaatgtggattccaagggtgttcatactgttctgaagacaggc
aactgggtccgttattgtatctttgacctagcaacaggaaaagctgaacaggagaataat
tttcctacaagcagtattgcttttcttggtcaaaatgaacgcaatgtggcaatttacaca
gctggtcaggaatcccccattgttctcagggatggaaatggcaccatttatccaatggct
aaggattgtatgggtggaatccgagatcccgattggttagaccttccaccgattactagc
ctcgggatgggtatccattctttgacaaaccttcctgcaaattcatctattaagaagaaa
gcagcagtcattgtaatgactgtagagaagcaagcattaatgcagcacatactgagatgt
gattatgaagcctccaggcaatacttgatgaatcttgagcaggctgttcttttggaacaa
accccacaagctctcaagatgttcctgaacaatcggtgtgatggaaatcgcaatgtcttg
catgcctgtgtctccgtctgtttcccaacaagcaataaagagacaaaagaggaagaagaa
gcagagcgctctgaaaggaatacgtttgcagagaggttatctgcagttgaggccattgca
aatgccatctctgtcgtgtcaagtaacaacagtggtaacaggactggaccatctagcagt
aggagtttaagattacgtgaaatgatgagacgctcacttcgagctgccggcttgggacgg
catgaatcgggtgcttcatccactgaccatcaggacccagtatctcctcctattgcccca
cttagctgggcaccagatccacccgcaattgatccagacggtgacattgattttatcctg
gcacctgcggtgggatctcttaccacagctgcatctggtactggacaaggacccagcaca
tctaccatacctggtccttcagctgatccacctgtagtggaatcaaaggatagaaaagca
aatgctcatctaatcttaaaattactttgtgaaagtgtggtactgcgaccttatcttcga
gaattgctctcagccaaggatgctagaggaatgactccatttatgttgggtgttggtggg
cgagcttatcctgcagcaattaccattctggaaactgcacagaagatagcaaaaggtgat
gtttcaggtgaaaaggaagaggatgtattcatgagtatgatttgtccacctggcactaat
ccagacgactctccattgtatgtcttgtgctgcaatgatacctgcagttttacgtggact
ggggcagagcatattaatcaggatatatttgaatgtaggacctgcggattgctggagtct
ctgtgctgctgcacagagtgtgcaagagtatgtcacaagggtcatgactgcaagcttaaa
aggacatcccctacggcttattgtgactgctgggagaaatgtaaatgcaaaactctgatt
gcgggacaaaaatctgctcgtcttgatctactctatagactacttacaacaaccaatctt
gtaactctaccaaatagcaggggtgaacatctactgctgttcctagtacagactgttgct
cggcaaactgtggagcactgccaatatcggccaccacgaatacgagaggaccggaaccgc
aaaactgcaaatgttgaagattctgatatgcctgatcatgatttggagccacctagattt
gcccaactggccctggagcgtgtccttcaggactggaatgctctgaaatctatgatcatg
tttggttcgcaggaaagcaaggacccgctcagcgcaagcagtaggattgctcacctccta
ccagaagagcaagtctacctttctcaacagagtggtacaatccggctggactgttttaca
cattgcctcattgtgaagtgtacagctgatattttacttttggacactttacttggaacg
ctggtaaaggagctgcagaataaatatacaccagggcgtcgagaggaagccatcactgtc
accatgagatttctgcgctcggttgcaagagtgtttgtcattcttagtgtagaaatggct
tcatcaaagaaaaaaaacaactttgtacctcaaccaattggcaaatgcaagcgtgtgttc
caagctctgctaccttatgccgtagaggagttgtgcaacgtagcagaatctttaatagtc
cctgttaggatgggtattgcacgacctacggctccctttacattggcaagcactagtcta
gatgctatgcaaggcagtgaggagctgttctcagtagagccacttcctccaaggcaatca
tctgaccaatctagcagttctagccagtcgcagtcttcctacatcattcgcaatccacag
cagaggcgtattagccaatcgcaacctgttcgtggccgagatgaggaacaagatgatata
gtgacagctgatgtggaagaggttgaagtagtggagggggtggctggtgaggaagatcat
catgatgaacaggaagagcagggtgaagaaaatacagaagcagagggacagcacgatgaa
cacgatgatgatgggagtgacatggagcttgatctgttggcggcagcagaaaccgaaagt
gacagtgaaagtaaccatagcaaccaggataatgccagtgggcgcaggagtgttgtcacc
gcagctacggcagggtctgaagcaggtgccagcagtgtcccagcattcttctcagaagat
gattctcagtccaacgactccagtgattctgacagcagtagtagtcagagtgatgatgaa
gaacaggacacgtttttacaggatgaacctttggaaaggactaccaacagttcccatgca
aacagtgcagctcaagctccacgctccatgcagtgggctgtgcgcagtacacagaaccaa
aggtcaaccaacacaactccatctagtactagtgctcctgcaggcggctcagcgggtttg
atttatattgacccgtccactttacggagaagtgccaccattagtacaagtgcagctgcg
gctgctgcagccctggaagccagcaattccagtagttatctcacatcagcaagcagcctg
gcaagagcctatagcattgtcatacggcaaatctcggacctcatgggtttanatcccaaa
tataatcacttggtgtactctcaaataccagctgccttgaaaataacataccaggatgcc
attaacttgcagaattacgtggaagagaagctcatgcccacatggaactggatggttagc
atcatggattcaaccgaagctcagttacggtatggttcagcgctgtcttctgctggggac
cctggtcatcctagccatcctttacatgcatctcaaaattctgctagaagagagagatta
acagcacgagaagaggccagtctaagaacgttagagggaagaagacgtgcaaccttgttg
aatgcgcgtcaaggaatgatgtcagcccgtggtgattttctcaactacgcactttctttg
atgcgttcacataatgatgagcattctgatgtcttgccagtgttggatgtttgttcatta
aaacacgtagcatacgttttccaggcacttatttattggattaaagcaatgaatcagcag
acaacattagatacaccacagctggaacgaaaaagaactcgagagttgttggagctgggt
cttgacaatgaggattcagagcatgaaaatgatgatgatacgaatcaaagtgctggtctg
catgacaaggatgacgaattactgtccacagaggctggtcagaaccatccattcttccga
cgttctgattccatgaccttccttggctgtattcctccaaatccatttgaagtttcttta
gctgaagcaattccacttgcagaccaacctcaccttttacagcccaatgctagaaaggaa
gatttatttggccgtccaagccaaggtctatattcgtcatcttcaggccttggaaaaggt
gtaacagaagtaactgtggatagaaattgcctagaggtactgcccacaaaaatgtcttat
tcttctaacctgaagaacgttatgagtatgcagaatcgacagaggaagacgacagatgag
caagtattaccagaagatgagtctgaaaattcacggataggaccttctgctcaggatctt
gcagcacaattgaagagtagtttattggctgagattgggctcactgagagtgaaggacca
cctcttacttcattcagaccacaatgtagtttcatgggaatggtgatctctcatgacatg
ttgttaggacgttggcgtctgtctttagaactctttgggcgagtgtttatggaagatgta
ggagctgagcctggatcgatcctgactgagcttggtgggtttgaagtgaaagagtcaaaa
ttccgtcgtgaaatggaaaaactgagaaatgctcagtccagggatctaacattggaggtt
gatcgtgatcgagacctcttaattcagcaaacaatgaggcaactcaataatcactttgga
cgcagatgcactacaacaccaatgactgtacacagagtaaaggttactttcaaagacgag
ccaggagagggcagtggagtggctcgaagcttttacactgcaattgcacaagcatttctg
tccagtgacaaactgccaaacctcgactgcgtccagaatgcgagcaagggattacaaacc
agtctaatgcaacgactgagaaaccgagagagagaacgggaaagagaacgggaaagggaa
atgagaagaagtggtggaatgcgagcaggttctcgtcgagaacgagatagggagtcgaga
aggcagctttctatagataccaggcctttccggccagcatcagaaggcaatcccagtgat
gacccagatccactgccagctcaccggcaagctcttggagagcggttataccctcgggta
caagcaatgcagccagcatttgctagtaaaattacaggaatgttactagagctctcaccc
gcacagctcttactgcttctagcaagtgaggactctttgagagctagagttgatgaagcc
atggagctgatcattgcacatggaagggaaaatggtgctgatagtatattggacttggga
ttgctagattcaacggagaagactcagcaggacactagaaaacggcacggctctagtcgg
agtgttgttgacatggaacttgatgagccggatgatggcgatgacaatgctccgctcttc
taccagcccggcaagcgagggttctactcaccaatgccaggcaaaaacaccgaggcccga
ctcaactgcttccgtaatatcggcaggattttgggtctgtgcctactacaaaatgaactc
tgtcctataaccctaaatagacatgttattaaagttctactaggaagaaaggttaactgg
catgattttgcattttttgaccatgtgatgtatgaaagtttacggcagctcatcctcgcc
tctcagagccaagatgcatatgctgtctttgcagcaatggacttagcttttgctatcgac
ctttgcaaggaagaaggtggaggacaggttgagcttgttcctggtggagccaatatccca
gtcactcctttgaatgtttatgagtatgttaggaaatacgcagagtaccgaatgttggta
gttgctgagcaacctcttcatgctatgcggaaaggactgctggatgtgcttcctaaaaac
tccctggaagatttaactgcagaagattttaggctcttggtcaatggctgtggggaagtg
aatgtccagatgctgattagctatacatcattcaacgatgagtctggggaaaatgctgag
aaattgctgcaattcaagcgatggttctggtctattgtggagaagatgagtatgacagaa
agacaggatctggtttacttctggacatcaagcccatcattacctgccagtgaggaaggc
ttccagccgatgccatccatcactattaggccaccagatgatcaacaccttccaactgca
aacacttgtatctcccgcctttacgtcccactttattcctccaaacaaattctgaaacaa
aaactgttactagccattaagaccaagaactttggttttgtgtag
DBGET
integrated database retrieval system
