Callorhinchus milii (elephant shark): 103175164
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Entry
103175164 CDS
T03088
Symbol
spidr
Name
(RefSeq) DNA repair-scaffolding protein isoform X1
KO
K22806
DNA repair-scaffolding protein
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmk03400
]
103175164 (spidr)
DNA repair and recombination proteins [BR:
cmk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103175164 (spidr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4503
DUF4502
zf-FPG_IleRS
Motif
Other DBs
NCBI-GeneID:
103175164
NCBI-ProteinID:
XP_007886187
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MAAARKRKRSEMVQGSNFPHDVEITCTRPRSLVKKSMPSIGKSWDRCGEGFQDSSQIEDD
GPLGKKLQVVRSLTSALQSNEADICRGQESEEKDNIVWSSSDSELSDPEMLLGNSKERLM
PKTQRTINSYHKYLHMINSLTDSQMSEDESPTIDWDSFSDNEEISDITQGAVDSYLTDSD
SSTSSKLENRKSATHQPTKSLAAYDISEFSSDSESSKESKLHEKRISSTLQGQLNVFSCE
SDRDQTAVRSASDWLKTAQAFLQTPEKQERKQFKTPDDSAKKKRKFLRGGLAERLNRLQC
RERSAIHFWRHQTTTDWRIPAAGKVGVLVLKILDLHEECSMLVTLCQPLIETSIDQTGED
EGTSTQAPLKVLFTRETASHLRIVSGDLVHVHSPWQKLVIQDQEGPVILCTYFSQKILSN
KDPGTKDNYCCPGQTEMVRKAPISLAMRFNLTASKLKHDFDCDQDKARSAENPSATQQES
LKKERGITHWSADNLVWDSLLEVIESQGTAGWTKQNVKVVIQRVYCLPVKDILHNQLTRK
DQSDISLPSNVGQQNARLCLLVQDVYGLFSEVQLRTYSLLEEDLQQQSACWEGKRCYLKG
MKIIQRTTRGRSSGLFSLIDSLWPPLIPPKVHGQSQGSQESVGSPSGALLPAPSFCYVLA
ARPGERGIELLQEENGSDLYRPTAWHNLEHILQYIPESHRCSFSAEVIYRRLQAQTANQQ
ISGENWVFVTDSTLQSSTHDPLVPRSLPVCVTSFCVLCAEVTKELNDGSSHTLLFKDAIV
EKDNIVCAEGTVLSLYNSVLDSSREQEFSQVTGPVTLDELSIATKMCSLCTVQGTVVGVD
ETTAFSWIVCNRCGSEKLEKKTGERKSLYCRQCVQPVTTPLTKMQLEVFLQYPALPQSTI
KVKLLQPSISSLLRHSSDDEEGYEIECVLGKETGPLNCYVRSVTKQPSCWIGLEEISLQQ
ASNQPLQ
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggccagaaagcgcaaaagatctgaaatggttcagggcagtaattttccacac
gatgtggagattacttgcacaagaccaaggagccttgttaagaagtctatgccttcaatt
ggaaaatcatgggaccggtgtggggaaggttttcaagactcttcacaaattgaggatgat
ggacctttagggaagaagttacaagtagtccgaagccttacctctgcactgcagtctaat
gaagcagacatttgcagaggtcaggagtccgaggagaaggacaacattgtgtggagctcc
agtgatagtgagctgtcagatcctgaaatgctgctgggtaattcaaaagagagattgatg
ccaaaaacccaaagaacaatcaattcctaccacaagtaccttcatatgatcaactcatta
acagacagccagatgagtgaagatgaatcccccacgatagactgggacagttttagtgac
aacgaagagatcagtgacataacacagggtgcagtggattcttatcttactgattctgat
tcttcaaccagcagcaaactggagaacagaaagtctgcaactcatcaacctacaaagtca
ctggcagcatacgatatttcagagttttcatctgatagtgaaagttcaaaagaaagcaag
cttcatgaaaagcgtatttcatcgacattacaaggtcaactaaatgtatttagttgtgag
tctgaccgtgatcagacagctgtccggtcagcaagcgactggttgaagactgcacaagca
tttctacagacccctgagaagcaggaaagaaaacaattcaaaacaccagacgattctgcc
aaaaagaagaggaagtttctgaggggaggactagcagagagattaaatagactccagtgc
agagaaagatccgccatacatttttggaggcatcagaccacaactgattggagaattcct
gccgctggaaaagttggtgttctggtgctgaaaattttggatttgcatgaggagtgttca
atgcttgtaactttgtgtcaaccattgatcgaaacctccatagaccagactggtgaggat
gagggcacttccacccaagcaccactcaaggtattatttacaagagaaactgcatcccat
ctcaggattgtttcaggagatcttgtccatgtccactcaccatggcagaagcttgtgatc
caggatcaagagggccctgttattttgtgcacttattttagccagaagatactttcaaac
aaagatcctggaacaaaagataattattgctgtccggggcaaaccgaaatggtcaggaaa
gctccaatatctttagcgatgagattcaacttgactgcttcaaaactaaagcacgacttt
gattgtgatcaggataaagcgaggagtgctgaaaatccatctgcaacccagcaggaaagc
cttaagaaggaaaggggtattacgcattggtctgcagataaccttgtgtgggactccctg
cttgaagtgattgaaagccagggaacagcaggatggacaaagcaaaatgtgaaagttgtt
atacaaagagtgtactgccttcctgttaaagacattcttcacaatcagctgaccagaaaa
gaccagtcagatatttccttgccatcaaatgtaggtcagcaaaatgcaaggctgtgtctt
ctggttcaagatgtgtatggattattcagtgaagttcaactacgtacatactctttgttg
gaagaggacctgcagcagcagagcgcatgttgggaaggaaagaggtgttatctgaaaggg
atgaagattattcagagaacaacaagaggaaggtcttcaggactcttcagtttgatcgac
agtctgtggcctccattaattccaccaaaagtccatggtcaaagccaaggcagccaagag
agtgtaggttctccctcaggtgccttgcttcctgctcctagtttctgctatgtacttgct
gctcgtccaggggagagaggaatagagctgcttcaggaggaaaatggatctgacctctat
cgaccaacagcatggcacaatttagagcacattcttcagtatattcctgaaagccatcgg
tgcagtttcagcgcagaagtcatctacagaaggttgcaggctcaaactgccaatcaacaa
atcagcggagaaaattgggtgtttgtgactgattcaacactacaatcctcaacccatgat
cccctggttcccagaagcctgccagtctgtgtaacctcattttgtgtattgtgtgccgaa
gttactaaagaactgaatgatggatcatcccacaccctcttattcaaggatgctattgta
gaaaaagataatattgtgtgtgcagaaggaactgtcctttcactctacaactctgtgctt
gacagtagtagagagcaagagttttcccaagtgactggacctgttacacttgacgaactc
agcattgcaaccaaaatgtgctcactgtgcactgtacaagggactgtggttggggtggac
gagactacagctttttcctggatagtttgcaacagatgtggaagtgaaaaactggaaaag
aaaactggagaaagaaaatccctttactgtcgtcaatgtgtccaacctgtgacaacgcct
cttacaaaaatgcaactggaagtgttcctgcaatatccagccctgccacagagcactata
aaagtaaagttgctacaaccaagcatttcttctctcttgaggcattcctccgatgacgaa
gagggctatgaaatcgaatgtgtgcttggtaaggagacggggcctctgaactgctatgtc
cgatcagtaacaaaacagccatcttgctggattggactagaagaaatcagcctgcagcaa
gcaagcaatcagcctttacagtag
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