Callorhinchus milii (elephant shark): 103175238
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Entry
103175238 CDS
T03088
Symbol
wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmk03036
]
103175238 (wdhd1)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
103175238 (wdhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Ctf4_C
Beta-prop_WDR3_1st
HMG_WDHD1
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
ANAPC4_WD40
WD40_Gbeta
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
HMG_box
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Tricorn_2nd
NBCH_WD40
eIF2A
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_WDR75_2nd
DUF6476
Beta-prop_NUP159_NUP214
Beta-prop_ACSF4
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
103175238
NCBI-ProteinID:
XP_007886321
UniProt:
A0A4W3IUA0
LinkDB
All DBs
Position
Unknown
AA seq
1127 aa
AA seq
DB search
MPAEKKPMRYAHPDGYTGVCYCESGRFIVTAGSDGDVRIWESLDDDDPKSINMGEKVYSV
ALKNGMLVTTVSNNIVQVHSFPEGTPDGILTRFTAEANHVVFNNSGTQVAAGSSDFMVKI
IDISDNSQQKTFRGHSGPVLSVAFDPENVFLASSSCDGSVFVWKIADQTRVINWLLLNKH
NDVSLTSSICRLDWQPKTGMLLAIPVDQTVKLYERETWQNSFDLSDNSITKPINIVSWSP
CGRYLAAGSADGSMVVWNVTTKECVERLQHEKAFKISAMAWHPKGGKIAYTDCEGNLGLL
EDILVDSGNKKPTSSAAPSFDELFDEDDNDLLTKDAQDHVNLSQSSPTRQPLMDDDEDDG
EYDMKTPRSRSKIHRVIDDNSHDIGSPTQEDQTDDGDQAVSVPTVPEPVRYLGPVPTPQQ
KPFQPCSTPSHLMHRFMMWNSVGIIRCYNDVQDNAIDVEFHDTSVHHAMHLSNVLNHTMA
DLSQEAVLLACEKSDELPSTLQCIHFSSTDANKEWMMVMPKGENIQAVCLGKGWAAVSTD
AQIIRIFSIGGVQKEIFSLAGPVVSMTGHGQQLLVSHHRGIGFDGDQCLGIQLMEFGKSK
PILQGVALPITRKSYLTWQGFSAEGTPAFSDSEGTVQMMNRALGNTWVPVCNIRDHCKGK
SDHYWIIGIHENPQQLRCIPCKGSRFPPTLPRPAVAILPFKLPYCQIDSEKGQMEEHFWR
SVLFHKHFDYLEASGYEIDEAAKGQALKEQQELLMKMFALSCKLEREFRCEELSAFMTQN
VLSLAIKYASRSKRLNLAQRLSYVAQEKAAELMNVQEVEEDLRAGMSAGKIGWNLSRVQS
QAQSYPEKEEVEYEENTVDNADGEDGLSTLEVHDARKKLNPFSKDLSSTEKTTPKPMTFA
TDNYGRGNPFKVMSAATFSTSAGSHARNANILDNMSKVSKKSTGIGNQSTNKPGSLVLKP
LAPKRKAKQIQATLFQSTSLKSGSKTVEEKAAKADPVPVVTSDKTKAEKKKPKTGYQLWL
EDNRSAILTDNPDLEEQEIIKEGMNRFRVLTSEERMSWTNRAKKDGGSINSGEDAKKRKR
SQDPSEDQQENEQETKKENSEESFAKKQKPPQVSTNSKLSAFAFQKD
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgaaaaaaagccaatgcgatatgctcatccggatgggtatactggggtttgc
tactgtgaaagtggaagatttattgtaacagctggcagtgatggagatgttagaatatgg
gaaagtctggacgatgatgatcccaaatcaatcaatatgggcgaaaaggtttattctgtg
gctcttaaaaatggaatgcttgttactaccgtttctaacaacatagttcaagttcattcc
tttcctgagggtacaccagatggaattctaactcgcttcactgcagaagcaaaccatgtc
gtcttcaataactctggcacccaagtcgctgctggttccagtgactttatggtgaagatc
attgatattagtgacaacagccaacagaagacttttcgaggtcatagtggtccagtcctc
agcgttgcttttgatccagagaatgtatttctggcttcttctagctgtgatggttcagta
tttgtctggaaaattgcagatcagacacgtgtaataaattggttgctgttaaataaacac
aatgatgtcagcttaacttcgtccatttgtagacttgattggcaaccaaagactggaatg
ttactggccattccagtggatcaaacagttaaactatatgaaagagaaacctggcaaaac
agttttgatctttctgataatagcatcactaagccaataaatattgtttcatggtctcct
tgtggtcgctacttggctgctggcagtgctgatggatctatggtggtgtggaacgtaacg
acgaaagagtgtgttgaaaggttgcagcatgaaaaggctttcaaaatctctgcaatggca
tggcatcccaaaggaggaaaaatagcatatacagactgtgaaggaaatcttggccttctt
gaagacattttagtagattctggcaacaagaaaccaacttcaagtgcagctcctagtttt
gatgagctttttgatgaagatgacaatgacttgcttacaaaagatgcacaagatcatgta
aatctgtcacagtcgtcaccaacacggcagccattaatggatgatgacgaagatgatggc
gagtacgatatgaagactccccgcagccgatccaaaattcatcgtgttattgatgataac
tctcacgatatcggatctcctactcaggaagatcaaaccgatgatggtgaccaagctgtt
agtgtgcctactgtaccagaaccagtacgttatttggggccagtgccaacacctcagcag
aagccttttcagccttgttccacaccctctcatcttatgcataggttcatgatgtggaat
tcagttggtattattcgctgctacaatgatgtacaagataatgctattgatgtggaattt
cacgatacttccgtacaccatgcgatgcacctgagtaatgtcctgaatcataccatggct
gatttatcacaggaagcagtgttattagcttgtgagaaatctgacgagctcccaagcaca
ctccagtgcattcacttcagctccacagatgcaaataaggagtggatgatggttatgcca
aaaggtgaaaacattcaagccgtttgcctgggtaaaggttgggctgctgtttcaactgat
gcccagattattcgcatcttcagcattggtggtgtacagaaggaaatcttcagtctagca
ggacctgttgtgtccatgacgggacatggacaacagcttctggtttctcatcacagaggc
atcgggtttgatggagatcaatgtctgggaattcaattaatggaatttggaaaaagtaaa
ccgattcttcaaggagttgctctccctatcaccaggaaatcatacttaacctggcagggc
ttctctgctgaaggaaccccagcattttcagactccgaagggacagtgcaaatgatgaac
agagctctggggaatacctgggttcctgtttgtaacattcgggaccactgcaagggcaaa
tctgaccattactggataattgggatccacgaaaatcctcagcagcttaggtgtattcca
tgtaaaggatccaggttcccacctacacttccacgccccgctgtagcaatcctaccattc
aagcttccttattgtcagattgattcagaaaaaggacaaatggaggagcacttctggcga
tctgttttgtttcataagcattttgactatctggaggcaagtggctacgaaattgatgaa
gctgcaaaaggccaagctctaaaagaacaacaagagctgctaatgaagatgtttgctctg
tcttgcaagttagagcgtgaattccgctgtgaagagctttctgcgtttatgacccagaat
gtcttgagcctcgctattaagtatgcttcacgttcaaaacgtctaaaccttgctcagcgg
cttagctacgtagctcaagagaaagctgcagagttgatgaacgtacaggaagttgaagag
gatcttagagctggaatgagtgctggtaagatcggatggaatttatcacgtgtgcaatct
caagctcaaagttatcctgagaaggaggaagtagaatatgaggaaaatactgttgataat
gcagatggtgaagatgggttgagtaccctggaagtacatgatgcaagaaaaaagttaaat
ccattcagtaaagatctcagctctaccgaaaagacaaccccaaaacccatgacatttgca
actgataactatgggcgtggaaatccatttaaggtgatgtctgctgcaacattttccaca
tctgctggcagccacgctcgaaatgccaatattctggacaacatgtccaaagtgagtaag
aagtcaacgggaatcggcaaccagtctacaaacaagccaggatcattggtcctgaagcct
cttgcaccaaaacgaaaggcaaaacagatccaagctacgttgttccagtcaacgtccctc
aaatctggcagtaaaactgtggaagaaaaggcagcaaaggctgatccggtaccagtggtc
acttcggataaaacaaaggcagagaagaaaaagcctaaaacaggatatcaactgtggcta
gaagacaacagaagcgccattcttactgacaatcctgatttggaggagcaagaaataatc
aaagaaggcatgaaccgattccgtgtgctgacatctgaggagaggatgtcttggacaaac
agagctaaaaaagacggtggaagcatcaacagtggagaggatgctaaaaagcgcaaacgt
tcacaagacccaagtgaagatcagcaggaaaatgagcaggaaaccaaaaaggaaaattct
gaagagagttttgcaaagaagcagaaaccgccacaagtatcaacaaattcaaaactgtcg
gcatttgccttccaaaaggattaa
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