Callorhinchus milii (elephant shark): 103175240
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Entry
103175240 CDS
T03088
Symbol
samd4a
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103175240 (samd4a)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
103175240 (samd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
SAM_3
Motif
Other DBs
NCBI-GeneID:
103175240
NCBI-ProteinID:
XP_007886325
UniProt:
A0A4W3IA72
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSRTQARFLQICLEHSLSDCTELHILEV
EANDPAFINQWHQESKDKVIMLLLTHLPLLKPGNIDAKMEYMKLLPKILAHSIENNQHIE
ESRQLLSYALIHPATSLEDRNALAMWLNHLEDRTSGYGGQSRGRPDSMDYGQTLYHQRQN
SDDKLNGWQNLRDSGICVSASNWPDKNPACENGHLPLYSSVSVPTTINTIGTSTTTILSG
QTHHSPLKRSVSLTPPINVPNQPLGHGWMSHEDLRGRGPQCIPSDHAPLSPQSSVASSGS
GGSEHLEDQPVSRNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQLTYEEMMGLTEVQLEA
QNVTKGARHKIVLSIQKLKERQNVLRSLEKDILEGGNLRNALQELHQMILTPIKAYNFPQ
TQNIDEQRQDLDSQSSLMSSDSSMGNRLSDGKDSATGGIQQHNVTGCEGESGAAPVPEGD
LPGQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKCVGHEAFTETQKKRMLSWKQQVQKL
FRSFPRKSLLDMPGYRQQRNWSFNQSNSLPAAGSVGGGMVRRTQRQFQMPPRNLPTARLG
LIGPSGLLGASQRSATNNPALLKQGRQNLWFANPGGSNSMPSRTHSSVQRTRSLPVHTSP
QTMLMFQQPEFQVPVTEPDINNRLESLCLSMTEHALGDGVDRNSTI
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgagatcaagtcggcgtgcttgcaggatggtttaaaggctggaacgaatgc
gaacaaactgtagcgttgctgtccctgttaaaacgagtgagccggacccaggctcgtttt
cttcagatctgcctcgagcattctttgtcagattgtaccgagcttcacattctcgaggta
gaggccaacgatcccgcattcatcaaccaatggcaccaagaatcaaaggacaaagtgata
atgctgttgctgacccatctcccattgctgaagccaggaaacattgatgcaaaaatggag
tacatgaaactcttacctaaaattttggctcattcaattgagaacaatcaacacatagaa
gagagtagacaacttttatcctatgctttgatccatcctgccacctcactagaagaccga
aatgcattagccatgtggctcaaccacttagaagatcgcacgtctggttatggaggccag
agcagaggacgtccagactcgatggattatgggcagactctctatcaccaaagacaaaac
tctgatgacaagctcaatggatggcaaaatcttcgggattctggtatctgtgtgtctgct
tctaattggccagacaagaacccggcttgtgagaatggacatttgccactttattcttcc
gtatctgtacccacaactatcaatactattgggactagcacaaccacaattctctcaggc
cagacacaccacagtcctctgaagcgttcagtgtctcttaccccaccaatcaatgtgcca
aatcagcctctaggtcatggatggatgtcccatgaagacctgcgaggaagggggcctcaa
tgtatcccatcagaccatgctcccctttccccacagagcagtgttgcttcctcgggtagt
ggtgggagtgagcatcttgaagatcaaccagtgtcccgtaacacattccaagaagagggc
agtggcatgaaagatgtcccagcttggttaaaaagtttgcgcctccataagtatgcagct
ttgttctcccaactaacgtacgaagaaatgatgggacttacagaagtacagcttgaggca
cagaatgttaccaaaggtgcaagacacaaaattgtcctcagtatacagaaattgaaagag
agacagaatgtgctcagatccttggagaaggatattcttgaaggtggtaatttgcgcaat
gcactccaggagctgcaccaaatgattcttacccccatcaaagcttacaatttccctcag
acccaaaacattgatgaacagaggcaagacttggactctcagtcctccttaatgagctcg
gacagcagcatgggaaatcggctgtctgatggaaaggactctgctactggaggaattcaa
caacataatgtgactgggtgtgagggggagtcaggagctgctcctgttccagaaggggat
ctgcctggacaatttacaagggtcatgggtaaagtgtgtacgcagctccttgtatccaga
ccagatgaagagaacataagctcttacctacagctcatagacaaatgtgtaggtcatgag
gcttttacagagacacagaagaagcgaatgttgtcatggaaacagcaagtccagaagctc
tttcgatcctttcctcggaaatccctattggacatgcctggctatagacagcaaagaaac
tggagttttaatcagtccaactcattaccagcagctggatctgttggtggaggaatggtc
agacgaacccaacgccaattccagatgccccctcggaatctgccgactgctcgtctgggg
ttaatagggcccagtggacttttgggtgcctcacagcgtagtgcaaccaacaaccctgcc
ctattaaaacaagggaggcagaacctatggttcgccaaccctgggggaagtaacagtatg
ccaagtcgaactcatagctcagtccagcgtacacgctcactgcctgtccacacatctccg
caaactatgctgatgttccagcaaccagaattccaagtaccggtgacggaacctgatata
aacaacagactggaatcactgtgtctcagtatgactgaacatgccttgggtgatggtgtt
gacaggaactcaactatctag
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