Callorhinchus milii (elephant shark): 103175367
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Entry
103175367 CDS
T03088
Symbol
si:dkey-22o22.2
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmk04515
]
103175367 (si:dkey-22o22.2)
Cell adhesion molecules [BR:
cmk04515
]
Cadherins
Cadherin related
103175367 (si:dkey-22o22.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
CADH_Y-type_LIR
Ig_Shg
Cadherin_CELSR2_9th
EGF
Cadherin_pro
hEGF
He_PIG
Y_Y_Y
EGF_Teneurin
Big_3_4
Motif
Other DBs
NCBI-GeneID:
103175367
NCBI-ProteinID:
XP_007886565
LinkDB
All DBs
Position
Unknown
AA seq
2834 aa
AA seq
DB search
MAPADTPGGARLLLHCLSLLSSTGGAAFHGPVSETPHPTPPTPPRTPVPGPRPPHPFGGT
ARPALGGDRDRDGAPRLPQTPVPAHPPGGQLGARYVLTLSPSPLPTPSGRSPAGASGAPR
VEVDETCPLGSEIARVTAADTDRPRGTADLVYRSPLPHPLLFVVPGTGQVLLVGSLLGVR
AIALVVDGRDGGAPPQVSDPLAVMVSVKAADLQPRRSRRGTRTRAAAEDVFHSVTVSEQS
NVGDVILAVPDRTFGGRWFEVIAPTDPPVHIERETGKVHLRERLRSPEALHITVQVNSQE
GDDWYLYHLTINVLRESFPEWTMPLYPYLATVSPDVPKGTPVFQLSAWDFTEDANDGIEY
FLKEGGEARFEVDRSTGIIRTTGLTLLRHNEYVLTVLAVDRRGNKGPYASIFILVGSRPP
QFTNVSYSVFVSENSPAGQTFVVVEAISFQKRPLSYSLLINPSSLFSVNQDNGELSLTHS
IDYETENHLYHLLVRALEAGTGFSSVTEVVIHINDENDCMPEFLHSIYSRDNIPETIPVG
TSLLQVLARDCDTGPNADISYFVQTTEFAVTPQGLISPNHQLNYERPNHMYEFVVVAVDK
GHPPRTGTASVRIRMTNVNDEAPVFSQNIYKTFLSEDAGPNSLVATVHAKDPDGDGVTYT
ITGGNEEGNFELDSQKGIIKLRRSPLPLLQGPQYVLNITATDDNSSGGPKTLSSIAHVIV
GINDVNNNKPVFRECAKYSEDAYVLENQPPGTFVLQIEAYDADLGVNGQVKYGFMLRDGL
TPGFHINPDTGSITTTRSFDREKQREYTVSVTATDQAQEPLISICQITIVIADENDNDPK
FENSRYQYYLREDTPVGTSFLRAAAHDDDQSTNAVITYSVSLQQPEYFQINPSTGWIYVN
HPISQVTHISRQILATDGGNRSSSVELTVTITNIHNQPPRWEQEEYRVTIPESSTRDLKI
VTIKATSPLGDPRVTYNLEEGQVPETNMPVRFYLKPNRANGSASILVAEPLDFEGTKFFT
LRVRAQNVAAVPLASFSTIYINVTDVNDNVPFFTSSTYEATVPEGAAVGTSVVQVSATDL
DTGLHGKVNYAILKDLSGDYHYFSIDFETGLIFTQTSFDREVKGSYLIEVQSQDNSESAR
PGMHGQPNTDTAYVRIFISDVNDNAPIFPQDVYEISVEEDKDVGFVVITAPANDEDEGAN
AKLRYQITSGNVKGMFDVEPEIGTIFIAQRLNYEEEQRYELRLVASDGKWENQTMVIVNV
LNKNDEAPIFSRNEYHANVVEELLDLPVLVLQVSAIDPDQEADQSALRYSLHGQGANSEF
TIDEVTGKIYAQQKLDREHRSVWRFLVLATDDNGEGLTGFADVIVEVRDVNDNLPLFLCA
SDGCFVGHVPENSPADTSIMEMTATDLDDTKTGKNAILTYRIIQNIQNEINLNLFSINPS
SGTVYTVLGSLDREKEDRYLVVVEAQDGGGLTGTGTATILVSDVNDHTPVFTQHVFMAKI
SENMEPNSNVLMVSASDEDKGENALLTFSIVGGDKDRKFFIETNKADMSATIKLKKQLDY
EKPQDRRFNLTLKVEDMDFSSKASCVIEVEDYNDHAPLFQPQYYEAAPLPEDVFIGTRVV
QVTAVDLDSSQNGEFTYSIAEISDPLGQFSVDANGWISVASALDRELTPQHQLVILAIDF
GSPALTGSVAVLLTVHDVNDNGPEFEAPYKPIVWENTAAPQLTQLNQTSVLMYAKDKDSP
VNGAPFSFTLLSAHGNSTDFALTDFGNGSAALTALRTFDREDQKAFYLPVVMTDSGTPPM
TSTNTLTITIGDRNDHPHSAGHTEFLVYNYNGQLATTDLGKVQAPDLDDWDDKTYRFEGI
SPRHFTLNAKSGLLSMTEGTPCGSYNFQVKVRDGTWPDVVSTVQVIVKELKEAAIYNAGS
LRLSDITAEEFISQSAGGESRYNRLRMFLAEIIPAQLEDVHIFSIVNVKDRTREVDIWFA
AEEPPFYKAEKMNGNMEASRAELESALDVRISQIAVDQCANIDCGATTGCTSLTAFNPTP
TVLSAGNVSFVSVTTATTAQCICKAREEQHLSCSSYPRNPCLNGGTCITTDLGFRCECSP
MFDGPECQQTRHTFRGHGYAWFPPIKPCFESLISLEFLTEAPNGLLLYNGPVTHVRAGET
EDYITLELRNGVPTLGINHGSGTLRLQLPSDGTVADRHWHRLDITSNGKRVKMTLDQCAG
AAVNENEGTGRGPSEMDRSMCEISGETPGEARFLNVYQPLQLGGVKESLPYHSKQAKFPG
FVGCVRNLVVDSKVYDLGNPGESSNSSPGCAVTDGVCHSAGTFSCGVHGKCLGEWGSFSC
DCKPGYTGYKCDKALPEWSFEKDSMIQHQQRGALSTRKTHTQLMLRTRTPNSSLFSLASK
DRSEYIVLEIVDGYVGVRANLGDWEHSLKLPTIRVDNGEWTIVNMDRHDNEFTLRLEHGG
GAREVTSVLGTHREILIDPSSLVLGSSLPEHPASDFQGCMRDVRLNGHLLPLDGKSTALT
MTLDRQGVTIGCHSDACINRPCSIPFNCVDLWRKHECRCPAGQTALRDSHTGLEHCTVSP
CGQWTCRNGGTCIAQTVVRFVCHCAEGYKGQWCEISLVTSGSPVGLSLTSLLAISMCLLL
FLVLVVGFSVWSMCGKTKFQKGGVYHIPVEHESWEDVRENILNYDEEGGGEEDQNGYDIS
ELKKPLRTSLSQSSSATTAPLLKVSPDSQEKPQASLNPGLNMTPAEISASSTLDFKKYVS
RIIWDADNDLRAIPEDTVHVYCFEGRGSLAGSLSSVETSSIEEDLNYDYLRDWGSKFDKL
KEFCGHKQDISVQC
NT seq
8505 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgcggacactccgggaggcgctcggctcctcctgcactgcctctccctcctc
tccagcaccggaggagccgccttccacggccccgtctccgagaccccccaccccaccccc
ccgaccccccccaggaccccggtgcccggcccgcggcccccgcacccgttcggcggcacc
gcgcgccctgccctgggcggggaccgggaccgggacggggctccccggctcccccagacc
cccgtccccgcccaccccccgggcgggcagctcggggcgcggtacgtcctgacgctcagc
ccctctcccctccccaccccgagcggccggagccccgcgggcgcgtcgggtgccccgcgg
gtggaggtggacgagacgtgccctctggggtcggagatcgcccgagtgacggccgcggac
accgaccgcccgcggggcaccgccgacctggtgtaccgctcccctctcccccacccgctc
ctgttcgtggtcccgggcaccgggcaggtgctgctggtgggctctctgctcggggtgaga
gccatcgccctggtggttgacggccgggatggcggtgcccccccgcaggtcagcgacccc
ctggcggtgatggtcagcgtgaaagccgcggacctgcagccccgcaggagcaggagaggg
accaggaccagggcagcggccgaggacgtgttccactcggtcacggtgtccgagcagagt
aacgtcggggatgtcatcctcgccgtccccgaccggacctttggagggcgttggtttgag
gtgatcgctccgaccgaccccccggtccacatcgagagggagacgggcaaagtgcacctg
cgggagaggctgcgcagccccgaggctctgcacatcaccgtccaggtcaacagccaagag
ggtgatgattggtatctataccatttgacgatcaatgtgttgagagagagcttcccagag
tggacaatgccgctatatccctatttggcaactgtatctccagatgttcccaagggtacc
cctgttttccagctttctgcttgggacttcactgaagatgccaatgatggaatagaatac
tttctaaaagagggcggcgaagcgcgattcgaagttgacaggagcacaggcatcatcagg
accacaggcttgactctgctcagacacaatgaatatgtgctaacagtgcttgctgtcgac
agacgaggcaacaaaggtccttatgcatctattttcattctggtcggctccagaccccca
cagttcaccaacgtgtcctacagtgtgtttgtttctgaaaatagcccagcaggacagacg
ttcgtagttgtagaagccatctcgttccagaaaagacctttgtcatactccctgctgatc
aatcccagtagtctgttcagtgtaaaccaggacaatggagagctgagcctgacacacagc
attgattatgaaactgagaaccacctctaccacctgctggtccgagcgctggaagcaggc
acaggattcagcagtgtcaccgaggtagtaattcacattaatgatgaaaatgactgcatg
ccagagttcctccactccatctacagtcgtgacaacattcctgaaactattcccgtgggc
acgtccttattgcaagtgctggcacgggactgtgacacgggccccaacgcagacatctcc
tacttcgtccagaccactgagttcgctgttacccctcaagggctgatcagcccaaatcat
cagctgaactacgagcgacccaatcacatgtacgagtttgtggttgtggctgtggacaaa
gggcatccccctcggactggaacagcatcggtgcggatcaggatgactaacgtcaatgat
gaggccccagtgttttcacagaacatctacaagacttttctctcggaagatgcaggaccc
aacagtttggttgctacggttcatgcaaaggatcctgatggtgatggggtgacttacacg
atcactggagggaatgaagagggaaatttcgaactggacagtcagaaaggtatcatcaaa
ctgcgcagaagcccactgccattgctgcaaggaccccagtacgtcctgaacatcacagca
acagatgacaacagctcagggggtcccaagaccctgagcagcatcgctcatgtcatcgtg
ggaatcaatgatgtgaataacaataaaccagtctttagagagtgtgccaagtacagtgaa
gatgcctatgttctggagaaccaacccccaggaacctttgtactgcaaatcgaggcgtat
gatgctgatctcggagtgaatgggcaggtgaaatatgggttcatgctccgagatggcctt
actccaggttttcacattaatcctgacaccggctcaataaccacaacccgcagttttgat
cgggagaagcagagggaatacactgtgtcagtgacagccaccgatcaggctcaggagccc
ctgatcagcatctgtcagataaccatagtcattgccgatgaaaacgacaacgaccccaag
tttgagaacagtcgttaccaatactacttgcgcgaagatactccagtgggcactagcttc
ttgcgtgctgcggctcatgacgatgaccagagcaccaacgccgtcatcacatattccgta
tcactccaacagcctgaatacttccagatcaatcccagcacaggctggatttatgtcaac
catcccatttctcaggtaactcacatcagtcgccaaatcctagccactgatggaggcaat
cgaagcagcagtgtagagctaacagtaacaattactaacatacataaccagccgccccgg
tgggaacaagaagaatatcgggtaacaatccctgagagcagcacccgggacctgaagatt
gtgaccatcaaagctacatctcctctgggggacccacgggttacgtacaaccttgaagag
ggtcaggttcccgagaccaatatgcctgtccggttctacctgaaaccaaaccgtgccaat
ggatccgcctctattctagtggcagaaccgctggattttgagggcacaaagtttttcaca
ctgagagtccgggctcagaatgtggcagcggttccattagcctcgttcagcactatctac
atcaatgtgacagatgtgaatgacaacgttccattctttacatcctccacatacgaggct
acggtccctgaaggggctgcagttggtacctctgtagtgcaggtatcagctaccgacctt
gatacaggactacatggaaaggtgaactatgccatactgaaggacctcagtggagattac
cactacttcagcattgattttgagaccggactgatattcacgcagacgtccttcgacaga
gaggtgaaggggtcatacctgatagaagttcagtctcaagacaactcagagtctgctcgg
ccaggcatgcacggacaacccaacacagatacggcttacgtgaggattttcatcagtgat
gtgaatgataatgcaccaatcttcccacaggatgtctacgagataagtgtagaggaggac
aaagatgttgggtttgttgtcataacagctccagcaaacgatgaagatgaaggggcaaat
gccaaactgagataccagattacctcaggcaatgtcaaaggtatgtttgatgtggagcca
gaaattgggaccatcttcatagctcagcgactgaactatgaagaagagcagcgttacgag
ctgcggttggtggcatcagatgggaagtgggagaaccagacgatggtgatcgtcaacgtt
ctcaacaagaatgacgaggctccaatcttcagtcggaatgaatatcacgccaacgtagtg
gaggagctgctggacctacctgtgcttgtcctgcaggtatcagccattgaccctgaccag
gaagcagaccagagtgccctgcgttactctctccatggacagggggcaaacagtgagttt
accatcgatgaggtgactggtaaaatctacgcccagcagaaattggaccgtgagcaccga
tcggtttggcgcttcctggtcctggccaccgatgataacggggagggcctcacggggttc
gctgacgtgattgtcgaggtgcgtgacgtgaatgacaacctgcccttgttcctgtgtgcc
tccgacggctgctttgtgggacacgtcccagaaaattccccagccgacacatccatcatg
gagatgaccgcaacggatctggatgacaccaagactgggaagaacgcgatattgacatac
aggataatccagaatattcagaacgaaatcaacctcaacctgttctccatcaatccatcc
tctgggacggtatacactgtgctgggatctctggacagagagaaggaagataggtacctg
gtggtagtggaagctcaggacggaggtggcctgactgggaccgggacagccactattttg
gtttcagatgtgaacgatcacactccagttttcacgcaacacgtcttcatggccaagatc
agtgagaacatggaaccaaacagcaacgttctcatggtgtccgccagtgatgaggacaag
ggggaaaatgctcttttgaccttcagcatcgtgggcggagacaaagatcggaaattcttc
atcgaaacgaacaaggctgatatgagtgccaccatcaaactgaagaagcagctagattac
gagaagccacaggacaggagattcaatttaactctgaaagtggaagacatggacttttcc
agcaaggcttcttgtgttattgaggtggaggattacaatgatcatgctccactcttccaa
ccgcagtattacgaagctgctccgttgcctgaagatgtctttatcgggaccagagtcgtc
caggtcaccgcggtcgatctggactcttcccagaatggggaattcacctacagtattgcg
gagatttcagatcctcttggacagttctctgtggatgccaacggttggattagcgtagcc
agcgccctggaccgcgagttgactccgcagcaccagttagtcattctggccattgacttt
ggaagtccggccctgaccgggagcgtggctgttctcctcactgttcacgatgtcaatgac
aatgggccagaatttgaggctccatataagcctattgtgtgggagaacacagctgcccca
cagcttacgcagttaaatcagacctcagtgctgatgtatgctaaagacaaagacagtcca
gtcaatggagcacccttctcgttcaccttactcagtgcacatgggaattccacggatttt
gccttgacagattttggcaatggcagcgccgctctcaccgcgctccgcacgtttgacagg
gaggaccagaaggcgttttacctgccggtggtaatgaccgacagcggaacgcctcccatg
acttccacaaacacattgaccatcaccattggagaccgcaacgaccatccccactcagca
ggtcacacggaattcctcgtctacaactacaatggtcaactggctaccactgatttgggg
aaggtacaagcccctgatctagacgactgggatgacaaaacatacagatttgaaggaata
tcacccaggcattttactctcaatgcaaaatcagggttgctgagcatgactgagggtaca
ccatgtggatcatacaacttccaggtgaaggtgagggatggtacctggccagatgtggtc
tccacagtgcaggttattgtcaaagaattgaaggaggctgccatatataacgctggctct
ctcaggctgagtgatatcacagctgaagagttcatctcccagtctgctggtggagagagc
aggtacaacaggctcaggatgttcttagctgaaataattccagcacagcttgaagatgtg
cacattttcagcattgtgaatgtcaaagatcgtacgagagaggtggacatctggtttgca
gcagaagaacctccattctacaaggctgagaaaatgaatggcaatatggaggcttccaga
gcagagctggaatctgccttggatgtaaggatatctcagatcgctgtggatcaatgtgcc
aacatagactgcggggcaacaactggctgcacaagcctcactgctttcaaccccacccca
acagtgctcagtgctgggaatgtgtcatttgtttctgtgacaacagccaccactgctcag
tgcatctgcaaagcccgagaagaacagcacttgtcttgttcctcctatccgcgtaaccct
tgtctgaacggtgggacttgtatcacaactgatttgggcttcaggtgtgaatgtagcccg
atgtttgatgggccagagtgtcagcagaccaggcatacgtttagaggccatggttacgcc
tggttccctccaatcaagccttgctttgagagccttatttccctcgagttcctcactgaa
gctcccaatggtcttctgctatacaatgggccagtaacacatgtgagggctggggagaca
gaagactatattactttagagctcaggaatggagtgcctacgctcggcatcaatcacggc
tcaggaacactccgcctccagctgccctctgatggcactgttgctgatcgacattggcac
cgtctggacatcacaagcaatggaaagagagtgaaaatgacacttgaccaatgtgctggt
gctgcagtgaacgagaatgaagggacaggaaggggaccatctgaaatggatcggagcatg
tgtgagatctcaggggaaactcctggggaagcaaggtttctaaatgtttaccaacctctt
cagctgggtggagtcaaggagtcgctgccataccatagcaaacaagcgaaattcccagga
tttgtgggctgcgtgcggaatctggttgttgacagtaaggtatatgacctgggaaaccct
ggggaatcctcaaacagcagcccaggctgtgccgtgactgatggggtgtgccacagtgct
gggaccttctcctgtggagttcatgggaaatgtttaggggaatggggctctttcagctgt
gactgcaaacctggctacacaggctacaagtgtgacaaagctctgccagaatggtctttc
gaaaaggacagtatgattcagcaccagcagagaggtgctctgagcactcgcaaaacacac
acgcaactgatgcttcggacccggactcccaattcttctctgttcagcctggcatccaag
gacagaagtgaatacatcgtactggagattgtcgatgggtatgttggagttcgtgccaat
cttggtgactgggaacattcactgaagctgccaacaatacgtgtcgacaatggggaatgg
accattgtaaacatggaccgacacgacaacgaattcactctacgtcttgagcatggagga
ggtgctcgtgaggttacctcagtccttggtactcacagagaaatcctgatagatccttct
agtctggtgttgggcagcagccttcctgaacatccagcaagcgatttccaaggctgtatg
cgtgatgtccgattaaacggtcatctcctgccgctggatgggaagagtacagctttgacc
atgaccctggatcgacaaggtgtgacaattggttgtcactcagatgcttgtatcaacagg
ccctgtagcatcccatttaattgtgtggacttgtggaggaaacacgagtgcaggtgtcca
gctggtcagacagcactgagagacagccacacaggtctcgagcactgcactgtatcaccc
tgtggacaatggacatgtcgaaatgggggcacgtgcatcgcacaaactgttgtccgcttt
gtttgccattgtgcagaaggttataaaggccagtggtgtgagatcagcctggtgacttca
ggatcccctgtgggactgagcctcacttcccttctggccatcagcatgtgtctgctcctg
ttcttagttttggtggttggcttcagtgtctggtcaatgtgtggaaagactaagttccag
aaaggaggagtttaccacattcctgtagagcatgagagctgggaagatgttcgagaaaac
attctgaattatgatgaggaaggaggtggagaagaggatcagaatggctatgacatcagt
gaactaaagaaacctctgcgaacaagcctgtcccagtcatcctcagcaacaacagctcca
ctgctaaaggtctctcccgattcacaagagaaaccacaggcgagtctgaatcctggcctt
aacatgacccctgctgaaatcagtgcatccagtacattagacttcaagaagtatgtgtct
cggattatctgggatgcagacaatgacctgcgagccatccctgaggacacggtgcacgtt
tactgctttgagggccggggctcactggctggcagcctcagctctgtggaaacatccagc
atcgaggaagacttgaactacgattatctcagagactggggctcaaagtttgacaaactg
aaagagttttgtggccataaacaggacattagcgtacaatgttag
DBGET
integrated database retrieval system