Callorhinchus milii (elephant shark): 103175652
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Entry
103175652 CDS
T03088
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103175652 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103175652 (nup85)
03036 Chromosome and associated proteins [BR:
cmk03036
]
103175652 (nup85)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103175652 (nup85)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103175652 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
103175652
NCBI-ProteinID:
XP_007886977
UniProt:
A0A4W3GDD5
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MSFERVDRTKGTSVGRRSRRLGGPPRARGPVRAAARAAAAAAAMEELEPPETKIVGVDPG
HHNMGFEWGPVEILVYPIKRKGADIPTPSGGSSAAPAIQVVRKDKDIYSPILRKLFNESH
GIFVALQTTKKENVAKARKLQLVRVSRNYRSVMRAYMEELHKVSETVHHDPALFTQFENQ
VSILSAMELIWNLCEVLFIEAAQAGFLLLHLLDWVRLHVCQVDSMAPEVLASDSPTEHRS
YWDVVTGYVLQGRIEEARQMLAKKALLAPSAHSMYVSMDDLLKKMPVFMPASSQTLTEFE
LKWRHWHEECQRCLREGTFASSDALQLICQILLGDEKALLEKKDLLTTWYHYLVTKLLYS
HPSVKPTDLHHFAEVCLDQFTRDSNGPDALDRILLSAFEFNIHQVLKDCSVALSNWWFVA
HLTDLLDHCSLLQSHNLHFGSNLREFLILEYASGLFCHHSLWQLATDYFDHCPEFGRVYL
ELHIERVPLNTERKALKVLRICEQRQMNEQVRSICKIMAMKAVRNNRLGSALSWSIRAKD
AAFATLISDRFLQDYCARGSFSDLDLINNLGSAMLLSDRLTFLGKYCEFHKLYGEKRFPE
AARLLLSLMTARIAPRSFWMTLLVDALPLLEQKQVIFSTEQTYELMHCLEDVTTAQAESK
QESRRIADEDDVESTKLELLRLAFTRNLAKAIVQEGTLPGS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgagagagtcgatcggacaaagggaacgtctgtgggaaggcgatccaggcgg
ttgggaggcccgccccgggctcggggtcctgtgcgagcggcggcgcgtgcggcggcggca
gcggcagcaatggaggagttggagccgccggagacgaaaattgtgggagtggaccccggt
caccacaacatgggatttgaatggggtcctgtggaaattcttgtctatccaataaaacgc
aaaggagcagatattccgactccttccggaggttcctccgcagctcccgctattcaggtg
gtgcgtaaagacaaagacatttactcgcccattctacgcaaactcttcaatgagtcacac
gggatctttgtcgccctccagaccaccaagaaggaaaatgtcgccaaagctcgcaaactg
caactggtcagagtcagcagaaactaccgttcagtgatgagagcttacatggaggaactg
cacaaagtatcggaaactgttcatcacgatcccgccctgttcacccagtttgaaaatcag
gtttccattctgtctgccatggagctgatctggaatctttgtgaggttctgttcattgag
gcagctcaagctgggtttctcctgttgcatctgttagactgggtacgtctgcacgtgtgc
caggtggacagcatggctccagaggttctggccagtgatagtcccacagaacatcgcagc
tactgggacgtggtcactggctacgtgctgcagggcaggatagaggaggctcggcagatg
ttggcgaagaaggccttgctcgctccatcagcgcattccatgtacgtcagcatggatgat
ctactgaagaagatgcctgttttcatgcctgcaagctctcagacactgacggagtttgag
ttaaagtggcggcactggcatgaggagtgccagcgatgtctgagagagggaacctttgcc
tccagcgatgccctgcagttaatctgtcagatcctattaggagacgagaaggcattacta
gagaagaaagatctcctgaccacgtggtatcattacctagtcactaagttgctgtactct
catccctcagtaaaacccactgacctgcatcactttgcagaggtctgtctcgatcagttt
accagagactcgaacggtcctgatgccctggacaggatcctgttatcagccttcgagttc
aacatccaccaggtgctgaaggactgcagcgtcgctctgagtaactggtggttcgtggca
cacctgacagacctgctggatcactgcagccttctacagtcccacaacctccactttggt
tcaaatctgcgagagttcctgatcctggagtatgcctctggcctcttctgtcatcacagc
ctctggcagctggccacagactattttgatcactgcccggagtttggtcgtgtttacctg
gagctgcacattgagcgagtgccgctgaacactgaacgcaaggccctgaaagtgctgagg
atatgtgaacagcgacagatgaatgagcaagtgaggagtatctgcaagatcatggctatg
aaggccgtgcgcaacaaccggctgggctcagcgctgtcctggagcatccgagcgaaagac
gccgccttcgcaactctcatctctgataggttcctgcaggattactgcgctcggggcagc
ttctctgacctggacctgatcaacaacctgggctcagctatgctgctgagtgaccggctg
accttcctagggaaatactgcgagttccacaaactgtacggagagaagcgtttccccgag
gcggccaggctgctgctgtccctgatgaccgctcgcatcgctccccgctccttctggatg
actctgctcgtggacgcactccctctgctggagcagaaacaggtcatcttttccacggag
cagacgtatgagctaatgcactgtctggaggacgtcacaacagcacaggctgagagcaag
caagaaagcagaaggatagcagacgaggacgacgtggagagcacgaagctggagctgctt
cgcctcgccttcacacgcaacctggccaaagccatcgttcaggaggggacgctgcctggc
tcttga
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