Callorhinchus milii (elephant shark): 103175672
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Entry
103175672 CDS
T03088
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmk03016
]
103175672 (tsen54)
Transfer RNA biogenesis [BR:
cmk03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
103175672 (tsen54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
103175672
NCBI-ProteinID:
XP_042198339
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MAAAEEPSDCGESDRSRVLSCEELFAARSRDHKIPQRSHGQKDFFPDQSEEQAEKLRLCR
EEQRQLLSEERVERLGSLVRTEWNRQENIVELTSNAGKFWHTMGHVRHGKQLLYPEEALY
LLECGSIQIYYRELPLSIQEAYEILLSAQTIPLHHYQVYSHLKRLGYVVMRFNPSGVPTA
YEQKLNLEPHLKASDKHQRKRKRSISPDTGRGKDSDRGQAERSREGERSVVAEAEEGVAK
KSQCLDGDGSLKDKVEPPLEPGLRNASIRLESAQEASGSVDDWPMEESTLASPGPVHSSP
QRAHTSSVSMRRLRWDFSQIRFPNFARDCPHTNLPALDADLLPENVVGQACDAGAWRHKL
NQKQEKMSFREREKQERASRYKTDINKDRRVRQCANWKEYKTFLKWKQNRHDELPPHLWK
DQVQPLIKPRQVTSPGDLLQRIGILHSTRLLDGAACLKESTESVKITFNVYQADTVAAFR
KSQPGKPYSRMCVCSFEESVPDLRLMKALSYQSGDVPIVFAVVDSGDISFYTFKEFKLPV
DVYH
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgaggagccgagcgattgcggggagtcagaccgcagccgtgttctcagc
tgtgaggagctttttgcagcccgctcccgggaccacaagattcctcagagatcccacggc
cagaaggacttcttcccggaccagtcggaagagcaggcggagaagctgaggctgtgccgt
gaggaacagcggcagctcctctccgaggagcgagtggagcggctaggcagcctggtaagg
acagaatggaacagacaggagaacattgtggagctgacgtccaatgctgggaagttctgg
cacaccatgggacacgtgaggcacgggaagcagctgctgtatcctgaggaagcgctgtac
ctattggagtgtgggtccatccagatatattacagagagctgcctctgtccatccaggaa
gcttacgagatcttactgtctgctcaaactatcccactgcatcattatcaggtttacagt
cacttgaaaagactggggtatgttgtgatgcgatttaatcccagtggcgttcccacggcc
tatgagcagaagctgaacctggagcctcatctgaaagcctcggacaagcaccagcgcaag
aggaagaggagcatcagcccagacactggcagaggtaaggactccgaccgaggccaggca
gagcgatcgagggaaggtgagaggtctgtggtcgcagaggctgaggaaggtgtagcaaaa
aagagccagtgtttggatggagacgggtctctcaaagacaaggttgaaccgcccttagag
cccggcctgaggaacgcaagcatcaggctggagagcgcacaggaggcctcggggagcgtt
gacgattggccgatggaggaatccactctggcgtctccaggtcctgtccattcctctccc
cagagagctcacacgagctcggtgtcaatgaggcggctgcggtgggacttcagccaaata
aggttcccgaactttgcgagagactgcccgcacaccaacctgcccgccctggacgcagac
cttctgccagagaatgtggttggacaagcgtgcgatgcaggtgcctggcgacacaagcta
aaccagaagcaagagaaaatgtctttcagggaacgggagaagcaggagagggcaagcaga
tacaaaaccgacatcaacaaggacaggcgggtcaggcagtgtgccaactggaaagagtac
aagactttcttgaaatggaagcagaacagacacgatgagctgcctccccacctctggaag
gaccaggttcagccgcttatcaaacccagacaagtcacctcacccggagacctcctgcaa
cgtattggcatcctgcattccactcgcctcctggatggagctgcttgcctcaaggagtct
accgagagcgtaaaaatcaccttcaatgtgtaccaggctgatactgtggcggctttccgc
aaatcccagcccgggaaaccctattcaaggatgtgtgtttgcagctttgaggagtcggtg
ccagacctccgcttgatgaaggcactgtcctatcagagtggcgacgtgcctattgtcttt
gctgtggtggatagcggtgacatctccttctacaccttcaaggaattcaaactgcctgtg
gacgtctaccactga
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