KEGG   Callorhinchus milii (elephant shark): 103175678
Entry
103175678         CDS       T03088                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103175678
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmk03041]
    103175678
Spliceosome [BR:cmk03041]
 Complex A
  U2 snRNP components
   U2 related factors
    103175678
 Complex B
    103175678
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Transformer AAA_8
Other DBs
NCBI-GeneID: 103175678
NCBI-ProteinID: XP_042198252
LinkDB
Position
Unknown
AA seq 487 aa
MSDFDEFEKQLHENRQDHLHFLEREKERHKKRSRSGSRSRSRDKKRRSRSRDKRSRSRGA
RSRSREKRSSSRDRKQRHSRSPRRSRRKKPYKYWDVPPPGFEHITPMQYKAMQAAGQIPA
TALLATSTAGGVTITPTQVPIIGSQMTRQARRLYVGNIPFGVTEEAMADFFNAQMRLAGL
SQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGM
SEQPSFHVPGPSKNASSVCWTSFAGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFG
PLKAFNLVKDSATSLSKGYAFCEYVDVNVTDQAIAGLNGMQLGDKKLIVQRASVGAKNAN
PNAIIQTPVTVQVPGLPSMQVQTTGMPTDILCLLNMVSPEELIDDEEYEEILEDIREECS
KYGTVKSIEIPRPLDGLEVPGCGKIFVEFISSLDCQKAMQALTGRKFANRVVVTKYYDPD
LYHRRDF
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgtcggactttgacgagtttgagaaacagctgcacgagaaccggcaggatcacctacat
tttctagaacgggaaaaagaacgtcacaagaagcgaagtagaagcggatcgagaagtaga
agccgagataagaaacggagaagtcgtagccgtgacaagaggagccggagtcgaggggca
agaagcagaagtagagaaaagcggagtagctcacgagatcggaagcagcgtcacagtcgc
tctccccgtcgctctcgaagaaagaagccctataagtactgggatgtacctccaccgggc
tttgagcacattactccaatgcaatataaggccatgcaagctgcagggcagatcccagcg
acagcgctactggcaacctctacagcaggtggtgtgacaatcacaccaacacaggttcca
atcatcggcagccaaatgaccagacaggcgagacgactctatgttggcaatatacccttc
ggtgtcacagaggaagccatggcagacttctttaatgctcagatgcgtctagctggctta
tcgcaggctcccgggaaccctgtattggctgtgcagatcaaccaagataaaaattttgct
tttcttgagttccgttcagttgatgaaacgacacaggccatggcatttgatggcatcatc
ttccagggtcagtctttgaagatccgacgtccacacgattaccaacctctgccaggcatg
tctgagcaaccttctttccatgtcccaggtccgtcaaaaaatgcatcgtccgtgtgctgg
acttcctttgcaggcgtggtgtccacagtggtcccggattctccccacaagcttttcatt
ggcggtttgcccaattacctcaatgacgaccaggtgaaggaacttctgacgtcatttggc
ccactgaaagctttcaacctggtgaaggacagtgcaacatctctgtccaaaggatatgcc
ttctgtgaatatgtggatgtcaatgttactgatcaggctatcgcaggtctgaatggaatg
cagcttggcgataagaagcttatagtacagagggccagtgttggtgcaaagaatgctaat
ccgaatgccattattcaaacgccagtgactgtccaagtgcccggccttccatcaatgcaa
gtgcagaccacagggatgcccacagacatcttgtgcctgttaaacatggtatcaccagaa
gagctgattgatgatgaagagtacgaggaaattttggaagacattcgagaagagtgcagt
aaatatggaactgtgaaatccattgaaatccctcgaccactggacggactagaagtgcct
ggctgtggcaagatatttgtggaattcatctcatctctagactgccaaaaagcaatgcaa
gcattaacgggacgtaagtttgccaacagagttgtagttactaagtactatgatccagac
ttgtatcacaggcgtgacttctaa

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