KEGG   Callorhinchus milii (elephant shark): 103175776
Entry
103175776         CDS       T03088                                 
Symbol
sec31a
Name
(RefSeq) protein transport protein Sec31A
  KO
K14005  protein transport protein SEC31
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103175776 (sec31a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmk04131]
    103175776 (sec31a)
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cmk02044]
    103175776 (sec31a)
Membrane trafficking [BR:cmk04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    103175776 (sec31a)
Secretion system [BR:cmk02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   103175776 (sec31a)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EML_2 WD40 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_EIPR1 WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st TPR_Sec16 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_HPS5 WD40_RFWD3 Beta-prop_DCAF12 WDR90_beta-prop_4th Nucleopor_Nup85 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 103175776
NCBI-ProteinID: XP_042196460
LinkDB
Position
Unknown
AA seq 1261 aa
MKLKEINRTAIQAWSPAKQHPIYLAAGTSAQQLDATFSTNASLEIFELDLADSTLDMKSC
GTFSSAHRYHKLIWGGHGNEDDGLTSGVLVAGGENGNIILYNPSKIIAGEEDVVIGQIDK
HTGPVRALDFNPFQSNLVASGANESEIYIWDLNNFKTPMTPGSKSQPPEDISCVAWNRQV
QHILASANPSGRAVVWDLRKNEPILKVSDHSNRMHCSGLAWHPDVATQMAVASEDDRMPV
IQMWDLRFATSPLRVLENHTRGILAIAWSLADSELLLSCGKDNRILCWNPNTGEVVYELP
TATQWCFDIQWCPRNPAVLSAAAFDGRISIYSLMGGNVDEQRQRQADSISSSFGNLDPFG
TGQALPPLQLPQTTAQPSAVLPLKKPPKWVRRPVGATFAFGGKLVTFENMKPQHQQQAGP
FQVLVSQVVTETELLSRSNQLQSTVHSGDFVAFCQLKVDNAQTDFERNMWGFLKVNFEKD
SRHKYLELLGYQPEELAEKIVATLQEGNTGEKTPSDQAPDDSEQETESLEDSPTMEEEVP
GEAEEEEEEDDVALDESAPEMQDTDEAKFNISVSGDVDGLIKQALLTGNFEGAVDLCLHD
NRMADAIILAIAGGQDLLAKTQKKYFAKSNSKITRLIDAVVTRDWPEIVQSCDLQNWKEA
LAALLTYARPDEFAALCDLLGSRLESEDDSSLQAQACLCYICAGNVEKLVACWDKAQGGS
SPLALQDLIEKVVVLRKAIELRQGTNNNGVGDVLAEKMSQYANLLAAQGSLLAALSYLPI
DTSQLKIMHLRDRLFRAQGEQALGQQSAPFPDQMQQVTRGRDGTPGPSFAPGQNQQQATT
QQYYPQVRPAPTVTSWSNQTSTALPRLPPASTSNTQGEAPPPAGFIQQGFPNPSGQVLPQ
PSAAPAYSMYSQASTRPGFPQTYQPQQYPQGAGRPTLYQPHQPIAPPPPSSYPSSYLPSA
PSHSTAPPYPAPSQASPPIPGPASPFPPSLSGASYQHGGPGAPASSSGYALPTGPTGNIF
PQDPTDFLEGPQNGWNDPPALSRMPKKKIVVPGNYTPPAPITAPIMNPMADPQVQMQQQL
PQASAHLPLQASFQQHPSQQVHHNPYQAIPQTGIQPTLQTPKHSSEEAPGAPTGDIMQPV
QPLTTEKIAKKPIPEEHAVLKTTFEGLIQRCMTAAGDPQTKRKLDDANKRLESLYDKLRD
QVLSPTIIGGLHSIARSIETHNYAEGLNIHTHIVSTSNFSEISAFMPVLKVVLTLANKLG
V
NT seq 3786 nt   +upstreamnt  +downstreamnt
atgaagcttaaagaaatcaatcggaccgctatccaggcctggagccctgccaagcagcac
ccaatttacctggcggcaggtacctcggctcagcagctggatgcaacattcagcacaaat
gcttccctggagatctttgagctggatttggctgactccacacttgacatgaaatcatgt
ggcacattttcttctgcacacaggtaccataagctgatttggggtggtcatggaaatgaa
gatgatgggctgacatctggggtcctcgttgctggtggtgaaaatgggaacatcatcctg
tacaatccctccaaaatcatagcgggagaggaggacgttgtgattgggcagattgataag
cacactggtccagttcgagcactggacttcaatccttttcagagcaatcttgtagcttca
ggagccaatgagtcggaaatctacatttgggatttgaacaactttaaaactccaatgacc
cccggatccaaatcccagcctcctgaggacatcagctgtgtggcctggaatagacaggtc
cagcacatcctggcctcagctaatcccagtggtcgcgccgttgtttgggatctgaggaag
aatgaaccaatcctgaaagtcagcgaccacagcaaccgaatgcactgttcaggactggcc
tggcaccctgatgttgccacacagatggctgtggcctctgaggatgaccgaatgcctgtg
atacaaatgtgggatctgaggtttgcaacctctcctcttcgagtgctggaaaaccacacc
agaggaatcttagccattgcctggagtctggcagactcggagctactcctcagttgtggc
aaagacaaccggattctgtgctggaaccccaacactggagaggttgtgtatgagctccct
acagctactcagtggtgttttgatattcaatggtgtcccaggaacccggctgtcctctct
gctgcagccttcgatggccgcatcagcatctactccctcatgggcgggaatgtggatgag
cagaggcagaggcaggctgacagcatttcctcctcatttgggaacctggacccttttggc
actggacaggctcttcctcccttacagctacctcaaaccacagcccagccgagtgctgtg
ttgcctctgaagaaaccacccaagtgggtccggcgtcctgtgggagccacgtttgctttt
ggagggaagctggtgacctttgaaaacatgaagccccagcaccagcaacaggctggccca
ttccaggtacttgtcagtcaggtggtcacggaaaccgagctcctgagccgttccaaccaa
ctgcagtcgacagtccattcgggagactttgtggcattctgccagttgaaggtggacaat
gcccagaccgactttgagaggaacatgtggggctttctgaaggtcaattttgagaaggat
tctcgccataaatacctggagcttttaggatatcagccagaagagcttgcagagaagatt
gtggcaacactgcaggagggcaacactggagagaagaccccatcagatcaggctcctgat
gactctgagcaggaaacagaaagtcttgaggacagccccaccatggaagaggaggtcccg
ggggaggcggaggaggaggaggaggaggacgatgtggcactcgatgaatctgcacctgaa
atgcaagacacagatgaagcaaaattcaatatttctgtcagtggagatgttgacgggctg
atcaagcaggctttgctgactggtaacttcgagggagctgttgatctttgcttgcatgac
aatcggatggctgatgctatcattttagcaatagctggaggacaggaccttctagctaaa
acgcaaaaaaaatactttgcaaaatccaacagcaagatcactaggctgattgatgctgtt
gtgacgagagactggccggagattgttcagtcgtgtgacctgcagaactggaaggaagct
ttggctgctctgctgacctacgcgagacctgacgagtttgcagcactttgtgatctgttg
ggatcccggctggagagtgaggatgacagcagtctacaggcccaggcctgcctgtgctac
atctgtgctgggaatgtggagaagttggtggcctgctgggataaagctcaaggtggaagt
tcacctctggctcttcaggatctgattgagaaagtggtggttttacgtaaagccatcgag
cttcggcagggcacgaacaacaatggagtgggagacgttcttgcggagaagatgagtcaa
tacgccaatctgctggctgcccagggtagtctgttggctgctctgtcctacctgccgatt
gacaccagtcagctgaagatcatgcatttacgggatcgactgttccgtgctcagggtgaa
caggccttgggacagcagtcggctcccttcccagaccagatgcagcaagtcacaagaggg
agagacgggaccccaggcccttcctttgctcctggacagaatcagcagcaagcaacgacc
cagcagtactacccacaggttagacctgcccctactgtcacatcatggagtaaccagacc
tccactgccctccccaggcttccaccagcctctacgtctaacacccagggtgaagctcca
ccaccagcaggttttatacagcaggggtttcccaatcccagtggccaagtcctgccgcag
ccttcagcagcacctgcatacagtatgtattcccaggccagcactcgtcctggctttcct
caaacttaccaaccacaacagtatccccagggagcagggagacccactttatatcaacct
catcagcccattgcccctccacctccttcttcatacccttccagctacttgccttctgct
ccttctcactccacagccccaccgtacccagcaccgtcgcaggcatcccctccaatccct
ggccccgcttctcctttccccccttctctctctggagcgtcctaccagcatggcgggcct
ggggctccagcctcttcttcaggctatgcactaccgactggaccaacaggaaacatattt
ccccaggacccaactgattttttagaaggacctcagaatggttggaatgatcctccggct
ttaagcaggatgccaaagaaaaagattgtggttccaggcaattatactccccctgcaccc
atcacagctcccatcatgaacccgatggcagaccctcaagtccaaatgcagcagcagctg
cctcaggcttctgctcatcttccactacaagcttcattccagcagcacccaagccagcag
gtgcatcataatccataccaagcaatacctcagacagggatacaaccaacactacagaca
ccaaagcacagttcagaggaggcacctggtgcacctactggggacattatgcagccagta
caaccactaaccactgagaaaattgccaagaagcccattccagaagagcatgctgttctg
aagaccacatttgaagggctgatccagcgctgtatgactgcagctggagatccacaaacc
aagagaaaactggacgacgccaacaagcgattggaatccctgtatgacaagctccgggac
caggtgctgtcaccaaccatcattggcggtttgcacagtattgcgaggagcatcgaaacc
cacaactatgctgagggtttaaacatccacacgcacatagtcagcaccagtaacttcagt
gaaatctctgcctttatgccagttctgaaagtggtcctcaccctggccaataaactgggt
gtttga

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