Callorhinchus milii (elephant shark): 103175821
Help
Entry
103175821 CDS
T03088
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103175821 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmk03041
]
103175821 (dhx15)
03009 Ribosome biogenesis [BR:
cmk03009
]
103175821 (dhx15)
Enzymes [BR:
cmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103175821 (dhx15)
Spliceosome [BR:
cmk03041
]
Complex A
U2 snRNP components
U2 related factors
103175821 (dhx15)
Complex B
103175821 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
103175821 (dhx15)
Ribosome biogenesis [BR:
cmk03009
]
Eukaryotic type
90S particles
Helicases
103175821 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
ResIII
nSTAND3
Flavi_DEAD
SRP54
Atrophin-1
AAA_29
AAA_7
T2SSE
DUF3915
Motif
Other DBs
NCBI-GeneID:
103175821
NCBI-ProteinID:
XP_007887237
UniProt:
V9KFW2
LinkDB
All DBs
Position
Unknown
AA seq
768 aa
AA seq
DB search
MSKRHRVDLGDDYASNKKRLTSDGRKDRDRDRDKDYDRSKDRDRDRDRDRDRDRDRDREK
DSRNLSSPNLMTGGMPLITAPALHQQAINPFTNLPHTPRYYEILKKRLQLPVWDYKERFN
EILTKHQSFVLVGETGSGKTTQIPQWCVDSVRAVVGPKRGVACTQPRRVAAMSVAQRVAD
EMDVMLGQEVGYSIRFEDCSSAKTVLKYMTDGMLLREAMNDPLLERYGVIILDEAHERTL
ATDILMGVLKEVVKQRSDLKIIIMSATLDAGKFQIYFDSCPLLTIPGRTHPVEIFYTPEP
ERDYLESAIRTVIQIHMCEEEEGDVLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIP
LYSTLPPQQQQRIFEPPPPKKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVY
NPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNL
GSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPL
DPQLAKMVIASCEHNCSNEILSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTL
LNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYI
NIRKALVSGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYI
RTCTDIKPEWLVKIAPQYYEMSNFPQCEAKRQLERIIGKLHSKEYSQY
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggcaccgagtggatctgggggacgattacgcttccaacaagaagcggctc
acgtcggacggcaggaaagatcgagatagagaccgagacaaagattatgatcggtccaaa
gacagagatcgagaccgcgatagggaccgagatcgggaccgagatcgagatcgagagaaa
gattcaagaaatttatccagtccaaacttgatgacgggtggaatgcctttaatcacagct
ccagcacttcatcagcaggctatcaatcccttcaccaacctgccccacacaccacgctac
tatgagatcctgaagaagagactacagttacctgtgtgggattacaaggagaggttcaac
gaaatccttaccaaacatcagtcctttgtgttggtcggtgagactggctctgggaaaaca
acacagattcctcagtggtgtgttgattctgtgcgtgctgtggtaggacccaagcgtggc
gtagcttgtactcaacccaggagggtggctgccatgagcgtagcacagagagtagctgat
gaaatggatgtcatgctgggtcaagaggtcggctactcgattaggtttgaagactgcagc
agtgcaaaaacagttttgaaatatatgactgatggtatgctgctccgcgaagctatgaat
gatccactgttggaacgatatggtgtaatcatcctcgatgaggcccacgagcgtactcta
gccacagatattcttatgggtgtcttaaaagaggttgtgaagcaaagatcagatttgaag
attatcatcatgagtgccacacttgatgctggcaagtttcaaatctacttcgatagctgc
ccgctgcttacaattcctggtcgtacacatcctgtagaaatcttctacaccccagaacct
gagagagattacctggagtcagccattcggacagttattcagatccatatgtgcgaagaa
gaggagggagatgttctcctctttctaactggtcaggaggaaattgacgaagcttgtaag
aggataaagcgagaaattgatgacctgggtcctgaagttggagacatcaagatcattcct
ctctattccacattgcctccccagcaacagcagaggatatttgagcctccgcctccaaag
aaaccaagtggagccataggaagaaaggttgttgtgtccacaaacatcgctgagacttca
cttaccattgatggtgtcgtatttgtgattgatccgggctttgctaaacagaaggtgtat
aacccacgtatccgagttgaatcgttgttggtgaccgctatcagtaaggcttcagctcag
caaagagcaggtcgtgctgggcgtaccagaccaggaaaatgttttagactttacacggag
aaggcttacaaaaccgagatgcaggacaatacctatcctgaaatcttgagatctaacctg
ggttcagtggttctgcagctgaagaagcttggtattgatgatttggttcactttgatttc
atggatccaccagctcctgaaacactgatgagggccttggaacttctgaattatctggct
gcactgaatgatgacggagacctgactgagcttggatccatgatggcagagttcccattg
gatccacagttggccaagatggttattgccagctgtgaacacaactgttcaaatgagatc
ctctctatcactgcgatgctgtcagtcccacagtgttttgttcgcccaacggaggctaag
aaagcagctgacgaagccaagatgaggttcgcacatatagatggagatcacctgaccctg
ctgaacgtctaccatgcattcaagcagaaccatgagtcggttcagtggtgctatgacaac
tttattaactacagatccctgatgtctgctgacaacgtacgtcagcagctgtcacgaatc
atggacaggttcaacttgcctcgcaggagtacagaattcacgagtcgagactattacata
aacattagaaaggcattggtctctggttactttatgcaggtggctcatttggaacgaaca
ggtcactatctgacggtaaaagacaaccaggttgtgcagctgcatccatccactgtattg
gaccacaaacccgaatgggtactttacaatgagtttgtacttaccaccaagaattacatt
cgcacctgtacagacatcaagcctgaatggttagtgaagattgctcctcagtactacgaa
atgagcaactttcctcaatgcgaagccaaaagacaactggagcgcattattggcaaactt
cactcgaaggaatattctcagtactga
DBGET
integrated database retrieval system
