KEGG   Callorhinchus milii (elephant shark): 103175881
Entry
103175881         CDS       T03088                                 
Name
(RefSeq) collagen alpha-1(XXV) chain
  KO
K24356  collagen type XXV alpha
Organism
cmk  Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:cmk00536]
    103175881
Glycosaminoglycan binding proteins [BR:cmk00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103175881
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 103175881
NCBI-ProteinID: XP_042197237
LinkDB
Position
Unknown
AA seq 677 aa
MVPGPVPGPRVEAGGGGGGCRARWCPPAGLWALLSAASATLCICLSVRTSGLERRISALE
TAEGPALPVGRIPAPAAEQMRRMVRERVEQLVEQGSYQDVVKRRFARETSPECNCPPGPP
GKRGRRGRNGEPGPPGPPGPKGDKGDQGDQGPRGLPGSPTVAALHSNQILTVKGDQGQVG
SPGPPGPPGPPGPRGPPGDTGKDGPRGMPGVSGELGARGEKGLMGPKGPPGQKGSIGNTG
VPGFHGQKGDPGVSGEDGEPGQKGDLGEPGQKGDSGHPGLKGDHGEKGDPGSSAAGIKGE
PGHQGQKGEPGLPGLPGLPGIKGEPGFWGPQGEPGLPGLPGTKGEKGDGGPTGRGEIGLP
GFSGPKGEPGEPGISGRSGVKGDHGMNGESGPMGPRGPPGQKGEQGVTEIIDYNGNIHQA
LQRITTLTVTGPPGPQGSPGIQGPKGDMGLTGPSGRDGVQGLRGSKGDIGAPGDKGSIGL
PGLPGINGEKGEKGEKGDRGLPGLQGPSIVGPPGVPGMQGPSGPMGPHGLPGPKGEPGLN
GVKGGKGEPSEKGERGPLGLPGASGLDGQPGPPGMDGPMGPSGPAGPKGDRGEKGVGGDP
GPRGPTGLPGFSGHQGEKGDRGERGEKGLRGNKGEKGEPGQPGLDGLDAPCQLGPDGLPM
PGCWQKGGNPWLIARKK
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggtgccggggccggtgccggggccgcgggtggaggcggggggcgggggcgggggctgc
cgtgcccggtggtgcccccccgctgggctctgggctctgctctcggcggcatcggcgacg
ctttgcatctgcctgagcgtgaggacctccgggctggagcgcaggatctccgccctggag
accgcagagggacccgcgctgccggtggggcgcatcccggctccggccgccgagcagatg
aggcggatggtgcgggagagagtggagcaacttgtggagcagggatcctatcaagatgtc
gtgaaacgcaggtttgcgagagagacatcccctgagtgcaactgccctccaggccctcca
ggaaaacgaggcagaaggggaagaaatggtgaacccggccctcctggtcctcctggtcca
aaaggtgacaagggtgatcaaggagaccagggcccacggggtttgccgggctctcccaca
gtggcggctctgcacagtaaccaaatcctcactgtcaagggtgatcaaggtcaagttggg
tcccctggaccaccggggcctccaggtcctcctggcccacgtggacccccaggtgacaca
ggaaaggatggtccccgcggaatgccaggagtatctggagaattgggtgcaagaggtgaa
aaaggcttgatgggacccaagggaccgccaggacaaaagggctctataggaaacactggt
gttccgggctttcatggacaaaagggtgaccctggtgtatcgggggaagatggggagcca
ggacaaaagggtgaccttggagaacctgggcaaaagggagatagtggtcatccaggactg
aaaggtgatcatggcgaaaagggtgatcctggatcttcagcagctggaatcaagggtgaa
cctggacatcaaggacaaaagggtgaaccaggtcttcctgggcttcctggacttcctggg
ataaagggtgaaccaggcttttggggtccacagggagaacctggattacctggattacct
ggcacaaagggggagaaaggagatggaggacccactggaagaggtgaaattggtttaccc
ggattttcaggcccaaagggtgaacccggtgagccaggaatatcaggccggagtggggtt
aagggtgatcatggaatgaatggagaatcaggacccatggggcccagaggtccacctggg
cagaagggtgaacaaggagtcactgagatcatagactacaatggtaatatccatcaagca
ttgcagaggatcaccactctcactgttacgggtccaccagggcctcagggatctccagga
atacaagggccaaagggagacatgggcctaacaggaccatctggacgtgatggagtgcag
ggtcttagagggtcgaaaggtgacattggtgctccaggagacaaaggaagcataggcctc
cccggcttacctggtattaatggagaaaagggagagaaaggggagaaaggagaccgtggg
ttacctggcttacaaggcccttcaattgtaggacctccaggagtccccggaatgcaaggc
ccatcaggtccgatgggcccacatggacttccaggacctaagggtgaaccagggttgaat
ggtgttaaaggagggaagggtgaaccaagtgagaaaggtgaaagaggaccccttggtctc
ccaggcgcatctggcttagatggacagccaggaccgccgggtatggatggtccaatgggt
ccctcaggtccagcaggtccgaagggggatagaggtgaaaagggagtaggtggtgacccg
gggccaaggggccccacaggtttgcccggcttctcaggccatcagggagaaaaaggagat
agaggagaaaggggagaaaagggtctccgaggcaataagggggaaaagggggagccaggt
cagcctggcctggatgggctggatgccccttgccaattgggcccagatggattgccgatg
ccaggttgttggcagaagggaggaaacccctggctcattgctagaaagaaataa

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