Callorhinchus milii (elephant shark): 103175895
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Entry
103175895 CDS
T03088
Name
(RefSeq) LOW QUALITY PROTEIN: LIM and calponin homology domains-containing protein 1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cmk04990
]
103175895
Domain-containing proteins not elsewhere classified [BR:
cmk04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
103175895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
103175895
NCBI-ProteinID:
XP_042197495
LinkDB
All DBs
Position
Unknown
AA seq
1764 aa
AA seq
DB search
MASPSVKDMSWGHQHQDSSPAPAFTEAHTWIEQVTGRSFGDKDFRAGLESGIVLCELLNA
IKPGAVKKINRLPTPIAGLDNIALFLRGCEELGLKGSQLFDPGDLQDTTNKSSIKVTEYN
RKLKNVLITIYWLGKAANSCPSYSGPTLNLKEFEGLLSLIHKETEDTDSPKRSIRDSGYI
DCWDSERSDSLSPPRHARDDSFDSLDSFGSRSQQTPSPEVILKGSSDGRGSDSESDVPQK
APDVKRDDMSLRRASYHEPKANLPFNQYLPNKSNQTAYMPAPLRKKRAERGDHYRKSWSN
ATSPVGGERPFSHPEPIEEECSDEEFAETLPALSSVRGVEDTEATEKLKVSGGENSGACG
KQLLVCVAECSEHEAPKGDTKGEEKDDEEAKLKRMQKAGITVMPASKRYTSPNPFEENSG
QTTPDIILRRENAFLTNTQSVDLESEEEGEEEEQKMPDLEKDDLALRRTQLSQFKPKVVT
NQFLPGPCTKKDKERWENIKKSSQKAASNSQARHRKRPSPNHIQATESKAVAPQKGKTFL
KSQRRSESEEEEPTKAKVPDVQRDDLARRKTLGGLTSRHEPQTFIPTTVTQADMEIWERL
KVSTDTSEEAPKSLRHNCEVEPLPKIEVEKATQDDLAGRKARANKRASGSCQRFVHFGPV
TEIDQKRWEKLSIAKAGSDNEPEDKAGSCAIKAYTCHLLPSVVSAVVQTSHDSERGDQSQ
DIAEREICLASYNDLSSKPEETFTEMCTAEYFRNPPSPVLTVQTVNLNESIYSSSEGEED
EGKIPDLEKDDMMTRRIGATCKAKGPAFQQFLPVPSSQKGESKNEPLKEYEKDTKNVRSS
KDEAPWTYSPTAALSDDAGSVSMNDMRPEDDTLVEPHSKARHEEIRNIHNRLREEQDKWQ
DDLARWKSRRRSASQDLIKRKEEREFVEKIMSGEQNLSDRRKSIKTYKEIVEEKERRENE
LQEEYKKARNPEEAQAILKRYSQRFIISEAVLESLQLPKCLERSQSVDSDSSSSPTKDTN
VLKYLRQQSLPAQKYTATVEAMIIPPSQSQLNFSTGLTSPTRTVASKAVPMLTPKPYSQP
KDSQTVLKSFKVDGKIKMNGETSPTFTRVEGKECTSVVSALSLTKSQMFEGVTQVDCHPL
ISQTDDGKLAARPELVNCLSVNNKENKATEKEGTETSVSIAITQKISTEEKSDSNLSCNE
IERQIAVDAAQEDCKEDHRCYSETSTPHDVFSSNLDPKNAIVTEGVTDKSVSLNHEGEEP
RESAQKWHVQEMLNQGYFNKIKQVMRWTQLREKNPDSELDDKNHQPADVAELQEPPNPAS
VPLTVRNSWRRSEFFSQSAEMEAKENLNIPVAPLNIPKCFERWSWDPEEERKRQERWQKE
QERLLQERYRREQEKLRQEWEKAQKEVEEEERRYHEEELKIIQETVAPITSRSTGFSNQI
PTEWISPPITEENRNPAPIEETAADRKHKQLALQNQKQMVEAENWQPKEECQRLAEEERN
RQAAQEKGGQAGEQQRLTSEQVEKLSSKKDENVQKDHWDDTAKNKSENSNWQEVNQLTNE
EQRLNLQTVAHTNQMETEVVSERLKHADWQTSTTVHQQPTAQAAGSPVNSDRIWNTQELP
PSLELQRMKSHGVQDEQKTMSLDRSWTHQSNTGNTKRSGSHENLQSGQSVPLPHSTSSLQ
LQSPSRSVSGKKLCSTCRLPLGKGAAMIIETLSLYFHIQCFKCGICQGQLGDATTGTDVR
IRNGLLNCHECYIRSRIAGQPTTL
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcccagcgttaaagacatgtcgtggggacatcaacaccaagactccagccct
gctccagcattcacagaggctcacacatggatagaacaagtcacaggcaggagctttgga
gataaggatttccgagcaggtttggagagtggaatcgtactttgcgaattgttgaatgcc
atcaaacctggagctgtgaaaaagatcaatcgactaccaactcccattgcaggactagac
aacattgccttgtttttgaggggttgcgaagaacttggactaaagggatcacagctgttt
gacccgggtgaccttcaagatacaaccaacaagtcttcaatcaaggtaactgaatacaac
aggaagctgaaaaatgttttgatcactatttactggttgggaaaagcagcaaacagctgc
ccatcttacagcgggccaacactcaacctgaaggaatttgagggattgctgtctctgatc
cacaaggagaccgaggacacagacagcccaaagcgaagcattcgtgacagcggttacatc
gactgttgggactctgagcgcagcgactctctgtcaccaccccgtcacgccagggacgat
tcctttgatagtctggattcctttggctcgcggtcacaacagacaccatccccagaggtg
atactgaagggaagtagtgacggtcgcggcagtgactcggagtccgatgtgccacagaaa
gcgccggatgtgaaacgtgacgacatgtcgttgagacgggcatcctaccatgagcccaag
gccaacctgcctttcaaccagtacctgcccaacaagagtaaccagaccgcttacatgcca
gcgcctcttcggaaaaagcgggcggagcgaggagatcattatcggaagagctggagcaat
gcaacctcacctgtgggaggagagcggcccttcagtcatcctgagcctatagaagaagag
tgcagtgatgaggaatttgcagagacacttcctgcgttgtccagcgttcgaggggttgaa
gacaccgaggcaactgagaagctcaaagtgtcaggcggtgagaactccggtgcttgtggc
aaacaactgctcgtttgtgtggctgagtgttcagagcacgaggcccccaaaggagacaca
aaaggggaggagaaagatgatgaagaggcaaaactgaaaagaatgcagaaagctggcatc
acagtcatgcccgcttctaagcgttacaccagcccaaatccattcgaggaaaacagtggc
caaaccacgccagatatcattctccgcagggagaacgcttttttgacaaacactcaaagc
gtcgatctggagtcggaggaagagggagaggaagaggagcaaaaaatgccagatctggag
aaagatgaccttgccttgcggaggacacaactgagtcagttcaaacccaaagtggtcacc
aatcagttcctaccaggaccttgcacgaagaaggataaggagcgatgggagaacattaaa
aagtcctcacaaaaagctgccagcaactctcaagctagacatcggaaaaggccaagccca
aatcacattcaggccacagagagcaaggcagttgcgccacagaaagggaagacgttcctc
aagtcccagcgacggagcgagtctgaagaagaagagccaacgaaagcaaaagtcccagat
gtgcagcgagatgacttggccaggaggaaaaccctgggtggacttacaagtcgccatgaa
cctcagaccttcattcctactactgtcacacaggctgatatggaaatatgggagaggctt
aaggtttccactgacacaagtgaggaagctcccaagtcacttagacataattgtgaagtg
gagccattgcccaaaattgaagtagagaaagcgactcaagatgatcttgccggtcgtaag
gcgagagccaataaacgtgcttcgggcagctgccagcgctttgtgcatttcggcccagtg
actgagatagatcagaaacggtgggagaagctgagcatcgccaaggctggctcagacaat
gagccagaggacaaggcaggtagctgtgctatcaaggcctacacctgtcatctcttacct
tcagtagtctcggcagtagtccagacctcacacgatagtgagaggggagatcaatctcaa
gacattgctgagagggagatctgtttggcttcgtacaatgatctcagcagtaaacccgag
gaaacctttacagaaatgtgcacagctgagtattttcgaaaccctccctcaccagtcctg
accgtccagactgtcaatctgaacgaaagcatttatagttctagtgagggagaggaagac
gaagggaagatcccagatttggagaaggatgacatgatgacacgccggataggagccacc
tgcaaggcaaaaggtcctgcctttcagcagttcctcccagttcccagctcacaaaaaggg
gagtcaaagaatgagcctcttaaagaatacgaaaaggacacaaagaatgtgaggagctcc
aaggatgaagcaccgtggacatacagtcctacagctgccctttctgatgatgcaggaagt
gtcagcatgaacgacatgaggcctgaagatgacactctggtggagccgcacagcaaagcc
cgacatgaggaaatacgcaacattcacaatcggttgcgtgaggaacaggacaaatggcaa
gatgacctagctcgctggaagagtcggagaaggagtgcctcccaggatcttatcaaacga
aaggaagagcgggaatttgtggaaaaaataatgagtggagagcaaaatttatctgacaga
cggaagagcatcaaaacatacaaggaaattgtagaggaaaaagaacgcagagagaatgag
cttcaagaggagtacaagaaagcaagaaaccctgaagaagctcaagccattctgaaacga
tactctcagagatttatcatcagcgaagctgttctggaaagcttgcagttgccaaaatgc
ctggagagaagccagtctgtagattcggactcttcatcctcaccaacaaaagatactaat
gtactcaagtacttacggcaacagtctctgccggcccaaaaatatactgccacagtcgaa
gcaatgatcattccccccagccaatcgcagctgaatttttccacagggttaacatctccg
accagaactgttgcctcaaaggcagtgcctatgttaactcccaagccttattcacaacca
aaagattcacagacggtgttgaaatcatttaaggtagacggaaaaattaagatgaatgga
gaaaccagcccgacatttaccagagttgaagggaaagaatgcacatctgtggtttctgct
ctatcccttaccaaatcacagatgtttgaaggtgtaacacaagtggactgccacccatta
atatcacagactgatgatggcaagcttgcggccagacctgaacttgtgaattgtctttca
gtcaacaacaaggagaataaagctacagagaaggagggcactgagacgtcagtcagtatt
gccatcacgcaaaagataagcacagaggagaaatctgactcgaacttgtcctgtaatgag
attgaaagacagattgcagtggacgcagcacaagaagattgtaaggaagaccatcgatgt
tattcagaaacatcaactccacatgatgtgttttcaagcaatttggatccaaagaatgca
attgtgactgaaggggtcactgataaaagtgtctccttaaatcatgaaggggaagagccc
agggagagtgcacagaagtggcatgtacaagagatgttgaaccagggatacttcaacaag
ataaagcaggtgatgcgctggactcagctcagagaaaaaaatcctgacagtgaactggac
gacaagaaccatcagcctgcagatgttgctgaacttcaagagccacctaaccctgccagt
gttccgcttacagttcggaactcctggcgacgctcagagtttttctcacagtcagctgaa
atggaggccaaagaaaatttaaatatcccagtcgctcccttaaatatccccaagtgcttt
gaacgctggtcttgggatccagaagaagaacgcaaacgccaggaacgatggcagaaagag
caggaacgcttgctccaggaaaggtacaggagggagcaggagaagctccgccaagagtgg
gagaaggcacagaaggaagtggaggaggaagaacgtaggtaccacgaagaggaacttaaa
atcattcaggaaactgtggcaccaataacttcacgatcaactggattctcaaaccagatc
cccacagagtggatctcaccaccaataactgaggaaaacagaaatcctgcgcccattgag
gagactgcagcagacaggaagcacaaacagctggctttgcagaatcagaagcagatggtg
gaagcagagaattggcagccaaaggaagagtgccaaagactggcagaggaagagaggaac
agacaagcagcgcaagagaaagggggccaggcaggagaacagcaaaggttgacatcagag
caagtggaaaaactgagctctaagaaagatgaaaatgtacaaaaggatcattgggatgac
accgcaaagaacaagtcagagaattcaaactggcaggaggtcaatcagctgacaaatgaa
gagcaaaggttaaatttgcagactgtggcccacaccaatcaaatggagacagaagttgtt
agtgaaagactgaaacacgcagactggcaaacatccaccacagtccaccagcaacccaca
gctcaggccgcaggctccccggtaaattcagacagaatttggaacacacaagagcttcca
ccatcgcttgagcttcagagaatgaaatcacacggagtccaggatgaacagaagaccatg
tctctggacagaagctggactcatcagtctaatacaggcaacacaaagcggtctggatct
catgaaaatttacagtcaggtcaatctgtgccacttccacactcaacctcttctctgcag
ctccagtcacctagcaggtcggtcagtggtaaaaagctatgttcaacttgtagacttccc
cttgggaaaggagcagccatgatcatcgaaacacttagtctttatttccacattcagtgt
ttcaagtgtggaatctgtcaaggacaacttggagacgcaaccactgggacagatgtacgg
atccgcaatggtcttctgaactgtcatgagtgttacatcaggtcccgaattgctggacaa
cccactactttatga
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integrated database retrieval system
