Callorhinchus milii (elephant shark): 103175898
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Entry
103175898 CDS
T03088
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmk01002
]
103175898 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmk04121
]
103175898 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmk04147
]
103175898 (usp13)
Enzymes [BR:
cmk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103175898 (usp13)
Peptidases and inhibitors [BR:
cmk01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103175898 (usp13)
Ubiquitin system [BR:
cmk04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103175898 (usp13)
Exosome [BR:
cmk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103175898 (usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
103175898
NCBI-ProteinID:
XP_007887381
LinkDB
All DBs
Position
Unknown
AA seq
843 aa
AA seq
DB search
MAADIGELLVPYMPTIRVPRAGDRVYKSECAFSFDSPESEGGLYVCMSTFLGFGREHVER
HYRKTGQCVYMHLKRTVKVKPTGASGGALPKRRSPKVFLDLEQNKDMNHEDYEYEDEAKL
IIFPDHYEIPLPNIEELPALVTIACDAALTAKSPYRRQEPELWEEELKDSKHANSLQQLN
NSVRIPPSGWKCSRCNLRENLWLNLSDGSILCGKWFFDGSGGNGHALEHYRETSYPLAVK
LGTISPDGADVYSFAEEEVVLDPSIAEHLMHFGIDMLRMQTSETVKLDSDIKQRISEWQV
VQESEMKLKPIYGPGYTGIRNLGNSCYLSSVMQIIFSIPDFQRRYVGNLQRIFDYSPLDP
TQDFETQMTKLGHGLLSGHYSKPPVKYDIIEQPMKEAYKPQLQGIVPRMFKALAGKGHPE
FSSHRQQDAQEFFMHLVNLIERNRNGSDDPSDVFRFMVEERVQCCQSRKVKYTQRVDYLM
QLPIVLQAATNKEELIAYETKRREAEISKRPPPEPVRARIPFTACLQAFAEPENVNEFWS
SALQAKSAAVKTFHFASFPEYLVIQIKKFTFGVDWVPKKLDVSIDMPDLLDISFLKAKGL
QPGEEELPDITPPIVFPDRHKDHPLNHFMEFPEIEESSVMQLAEMGFPLEACRKAVYYTG
SMGAEVAFNWIIAHMEEPDFAEPLSLLGYNEASLPEVGLAGGASAVEKQPPEEIVAIITS
MGFSRNLAIQALKSTNNNLERALDWIFTHADSEEESEVASDTETNVNAEAEAEPAGPRIR
DGPARYELFAFISHMGTSTMSGHYVCHIKKEGRWVLYNDHKVCASEKPPKDLGYIYFYQR
LAF
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacatcggagagctgttggtgccctatatgccaaccatcagagtgcccaga
gcgggggacagggtctacaagagcgagtgcgccttctcctttgactctccagaatctgaa
ggaggtctgtatgtgtgtatgagcacatttcttgggtttggaagagaacacgtagagaga
cattaccggaagacgggacaatgtgtctacatgcatctgaaacgaactgtaaaagtgaaa
cccactggagcatcaggtggggcactgccaaagagaagatcacctaaggtgtttctggat
ctggaacagaacaaagatatgaaccatgaagattatgaatatgaagatgaagctaaactc
atcatatttcctgatcactacgagattcctttgcctaacatagaggagttgccagcactg
gtcacgatagcctgtgacgctgccctcacagctaaatccccgtacaggaggcaggaaccg
gaattgtgggaagaggagctgaaagactcgaaacacgcaaacagcctccaacaactgaac
aatagtgtcagaatcccacccagtggctggaaatgttccaggtgcaacctcagggagaac
ctgtggctgaacctgtcagacggctccatattgtgtgggaaatggttcttcgatgggagc
ggtgggaacggacatgccttggaacactaccgagagacgagctaccctctggctgtgaag
ttaggcaccattagcccagacggggcagatgtgtactcgtttgcggaggaggaggtggtc
ctggaccccagtattgctgagcacttgatgcactttggtatcgacatgctgagaatgcag
acgtcagaaactgtcaagctcgacagtgacatcaagcagcggatcagtgaatggcaggtg
gtccaggagtccgagatgaagttgaagccaatctatggcccaggatacacaggcatcagg
aacctcgggaacagctgctatctcagctccgtcatgcaaatcatcttcagcatcccagac
ttccagagaagatatgttggaaacctccaaagaatatttgactattccccactggatcca
acgcaagactttgaaacgcagatgactaagctagggcacggacttctctcaggtcactac
tccaaacccccagtgaaatatgacattattgagcagccgatgaaagaagcctacaagcct
cagctacaggggattgttccccggatgttcaaggccttggctgggaaaggacatcctgaa
ttctcatcccatcggcagcaggatgcccaggaattctttatgcacttagtgaacctgatc
gagaggaacagaaatggttcagatgatcccagtgacgtgtttcgctttatggttgaagaa
cgtgtccagtgttgccagtccagaaaagtcaaatacacccagagggtcgattacctgatg
caactccctattgtgttacaggcggctacgaacaaagaggaactcatagcatatgagacg
aagagaagagaagctgagattagcaaacggcctccgccagagccggtccgtgccaggatc
ccattcactgcctgtctccaggccttcgcagaaccagaaaacgtgaatgaattctggagc
agcgcactccaagctaaatcagcagcagtcaaaacgttccactttgcctcatttcctgaa
tacttggttattcaaatcaaaaaatttacctttggtgtggactgggtgccaaagaaatta
gatgtctccatagacatgcctgacctactagacatctcctttttaaaagccaagggttta
cagcccggagaggaggagctgcctgatattactccacccatcgtcttcccagatagacac
aaagatcacccgttgaaccattttatggagtttcctgaaatcgaggagtcatcagtaatg
cagctggctgagatgggctttcccctggaggcgtgtcggaaagctgtctactatacgggc
agcatgggggctgaggtggcctttaactggatcattgcacacatggaagaacctgatttt
gctgagccgctgtcgctattgggatataatgaagcttctctcccagaggtgggcctggct
ggaggagcctctgccgtagagaaacagccgccagaggagattgttgccattatcacatcc
atgggattctccaggaacctcgctattcaagccttgaaatcaactaataataacctggag
cgagcactggactggatcttcacacacgcggacagtgaggaggagagtgaagtagcgtct
gatacagagaccaatgtcaatgcagaagcagaggcagaacctgcagggcccagaatcagg
gatggacctgcaagatatgagctctttgcctttattagccatatgggaacatccacaatg
tctggccattatgtttgccatatcaaaaaagagggaaggtgggttctctacaacgatcac
aaagtctgtgcctcagagaaacctccgaaagacctgggatacatctacttctaccagcgc
ctggccttctag
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