Callorhinchus milii (elephant shark): 103176057
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Entry
103176057 CDS
T03088
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103176057 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmk04131
]
103176057 (vps35)
Membrane trafficking [BR:
cmk04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
103176057 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
103176057
NCBI-ProteinID:
XP_007887598
UniProt:
A0A4W3JE07
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAVQTVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYIK
SFSQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEETEESVTGDINDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDGLAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVDIFNKLNLEHIATSSAVSKELTRLLKIPIDTYNSILTVLKLKH
FHPLFEYFDYESRKNMSCYILSNALEYNTEIIAQEQVDAILSLVSTLIQDQPDQPAEDPD
PEDFAEEQSLVGRFIHLFRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FCYKENSKVDEKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGDIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSICAHLFWSGRNTDKNGEEIHDGKRVMECLKKALKIANQCMDPSLQVQLF
TEILNRYIYFYEKENEAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR
RESPESDGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaactcaacagtcccctcaggatgagcaggaaaagcttcttgatgaagcagtt
cagactgtaaaggttcagtctttccaaatgaagcgatgcttggacaagaataaactgatg
gatgcactgaagcacgcctccaatatgcttggtgagctgaggacttctatgctttcaccg
aagagctactatgaactctatatggccatttcggatgaactgcattacttggaggtttat
ctgactgatgagtttgccaaaggcagaaaggtggctgacctctacgaacttgttcagtat
gctggcaatataatcccgagactctacctgctcatcactgttggagtagtctacattaag
tcattttcccagtcacggaaggacattctgaaggacctggttgaaatgtgtcgtggagta
cagcatccgttgcgaggtctcttcctccgcaactatttgctccaatgcaccagaaatatt
ttgccagatgaaggggaagaaaccgaagaatctgtaactggagacatcaatgattccatg
gactttgtgctgctgaactttgcagagatgaacaaactctgggtgcgaatgcagcaccag
ggtcacagcagagaccgcgaaaagcgtgaacgcgaacgtcaggagttgcgaattcttgtt
gggacaaacctggttcgtctgagtcagttggaaggggttaatgtcgagaggtacaaacag
atcgtactgcctggaatactggaacaagttgtaaactgtagagatggtttggctcaagag
tatctcatggaatgtattattcaggtattccctgatgaatttcatctgcaaacattgaat
cccttcctccgagcttgtgcagagctccaccagaatgttaatgttaaaaacattatcatt
gcattgattgacaggctggctttgtttgcacaccgtgaagatgggccaggaatccctgct
gatataaaactttttgacatcttctcacaacaagtagctacagtcatacagtcaaggcag
gatatgccatctgaagatgtggtgtctttgcaagtgtctctcatcaacttggccatgaag
tgttatcctgaccgggtagactatgtggacaaagttcttgaaaccactgtggatatcttc
aacaaactcaatcttgaacatattgctactagcagtgcggtatctaaagagttaacacgt
ctcctgaagatccctatcgacacgtacaacagcatcttgactgtgttgaagctgaagcat
tttcatccgctgtttgaatactttgactatgaatctcgcaaaaatatgagctgttatata
ctaagcaacgcattggagtacaatacagagataattgcacaggaacaggtggatgctata
ctgagcttggtgtcaacgttgattcaggatcagccggatcagccagcagaagatcctgac
ccagaagattttgctgaagagcaaagtcttgtaggcaggtttattcacttatttcgatct
gaagatcctgaccagcagtatctgattttaaacactgcaagaaaacactttggtgctggt
ggaaatcagaggattcgtttcactttacctccgttggtctttgcagcctatcaattggct
ttctgctacaaagaaaactccaaagtggatgaaaaatgggaaaagaaatgccagaagata
ttttcttttgctcaccagaccatcagtgccctgatcaaagcagagcttgctgagctgcct
ctccgcctgtttctacagggagcgctggctgctggggatattgggtttgagaatcatgaa
acagtggcgtatgaattcatgtcgcaggcgttttctttgtatgaagatgaaatcagtgat
tccaaagcacagctggcagcaatcacgctcattattggaacgtttgagagaatgaagtgt
ttcagtgaagagaatcacgagcccttgaggacgcagtgcgcattggcggcttcaaagttg
cttaagaagccagatcagtgccgtgctgtcagcatctgtgctcacttattttggtctggt
cgaaacacagataaaaatggagaggagatccacgatggcaagagagtgatggagtgtctg
aagaaggctttgaagatagctaaccagtgtatggatccatcactacaagttcagctcttc
actgaaatccttaacagatacatatacttttacgagaaggaaaatgaggcggtgacgatt
caagtcttaaatcagcttattcaaaaaatacgagaagatcttccaaacttagaatccagt
gaagaaactgagcaaattaataaacactttcacaacacactggagcacctgcgtctgagg
agagaatcgcctgaatccgatggcccaatttatgaaggtcttgtcttgtaa
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