Callorhinchus milii (elephant shark): 103176085
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Entry
103176085 CDS
T03088
Symbol
cylda
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04217
Necroptosis
cmk04622
RIG-I-like receptor signaling pathway
cmk04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
103176085 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
103176085 (cylda)
04625 C-type lectin receptor signaling pathway
103176085 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmk01002
]
103176085 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmk04121
]
103176085 (cylda)
Enzymes [BR:
cmk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103176085 (cylda)
Peptidases and inhibitors [BR:
cmk01002
]
Cysteine peptidases
Family C67
103176085 (cylda)
Ubiquitin system [BR:
cmk04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103176085 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Zn_ribbon_Nudix
GRXCR1_C
Motif
Other DBs
NCBI-GeneID:
103176085
NCBI-ProteinID:
XP_007887636
UniProt:
A0A4W3JTG6
LinkDB
All DBs
Position
Unknown
AA seq
955 aa
AA seq
DB search
MSSTLRSNEKSNVSLREEHKYYLVVQDCSINDRVTQKSAKLPKGRILMLNNERGHHMSNI
YGTSKSKRFVSVQCLEQPYPIMSVEEKDIQEIDENIAELLLAIPNPDERYMLSKDKAKLQ
KALWIDCGTKVKVQLRTGEEKTPGIVRFKGPLLQSNPLSGLCFGVELLDEGWGRGYTDGC
YQGKHLFNCDEDCGIFVAFDKLEIVEEDDEEDGVLESNNADILDFNGKPIEVNSRVSTYI
RNKIEFGTVVFCGLLPGKETHGYFVGVDMDNQLGDWDGIYDGKVLCNVPPDERILLLKIK
DVMLETTPGTQAQHQKPGIGSSGGIGERIASNLYKSKSKELASQSGKSPGHNRSRSEFHF
TFHTTSNDPQTKSKSTWYIDEGSEDSAKSLTDTHSKFSQSPPTRSSLQPSLSNENRCHSL
PFSLTKKFGPDGSIGQGLSSSVQSMMDLNIGENQDIEVTGTPAKEQHSLEVGSLVEVNEN
PPLYGVIRWIGHPLGVNEQLAGLELEEESVGCTDGTFKGLRYFTCASKKALFVKLKSCRP
DSRFTSLPHHPNQIERCNSIAFGGYLSETVKENTPPKMEKEGLAIMVGKKRGXQGHYNSC
YLDSTLFCMFSFSSVLDTVLLRPKEKDDVEFYKDTQDLLRTEIVNPLRNHGYVCATKIMK
LRRILEKVEAASGFTSEEKDPEEFLNILFHHILKVEPLLKIRSAGQKVQDCYFYQIFMDK
NENVGVPTMQQLLEWSFISSDLKFAEAPSCLIVQMPRFGKEFKMFDKIFPSLELDITDLL
EDTPRECRICGGLAFVECRECYDDTDITAGKIKQFCKACNTQVHLHHKRQGHKQRKVCLP
EQMADYAWRQCCVPRQKMKLFAVLCIETSHYVAFVKYGPDDSAWLFFDSMADRDGGQNGF
NIPQVSQCPEIGKYLKMSPEDLHELDPKSIHGFARRLLCDAYMCMYQSPTMSLYK
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgagttccactttaaggagcaatgagaagtccaatgtatcgcttcgagaagaacacaaa
tattacttggttgttcaagattgtagtataaatgacagagtgactcagaagtctgcaaag
ttgccaaaaggcagaatattaatgttaaacaatgagcgaggccatcatatgtcaaatatc
tatggcaccagtaagagtaaaaggtttgtgtcagtgcagtgcttagaacaaccataccct
atcatgtctgttgaagaaaaggatattcaggaaattgatgaaaatatagctgagctgcta
ttagccattccaaaccccgatgagagatatatgctgtctaaagacaaagcaaaactacag
aaagcactctggattgattgtggcacaaaagtgaaagttcagctgaggactggtgaagaa
aaaacacctggcattgtgcgatttaagggaccgttattgcaaagcaacccgctgtctgga
ttatgttttggagttgaattgttggacgaaggttgggggcggggttatacagatggttgc
taccaaggcaaacatctcttcaactgtgatgaagattgcggaatctttgttgcttttgac
aagttggaaattgttgaagaagatgatgaagaggatggtgtacttgaatctaataatgct
gacattttggattttaatggaaaacctatcgaagtgaactcgagggtgtctacgtacatc
agaaacaaaatagagtttggcacggttgtattctgtggtctgttgcctggaaaggaaacc
catggctattttgttggtgttgatatggataatcaacttggagattgggatggtatatac
gatggaaaggtattgtgtaacgttcctccagacgaaagaattctccttttgaagataaag
gatgtaatgctagagacgactccagggacacaagcacaacatcagaaaccaggcattgga
tcatcaggaggtattggtgaaaggattgcatcaaatttgtacaaatcaaagagcaaagaa
ctggcttcacagtctggaaaatcgccaggtcataataggagcagatctgaatttcatttc
acatttcataccacatctaatgatccgcaaacaaaatcaaaaagcacatggtacattgat
gaaggaagtgaagactctgcaaaatcactcacagatacacactccaaattcagtcagtca
ccacccacaagatcatcacttcaaccttccctttcaaatgaaaatagatgtcattcgttg
cccttcagccttactaaaaagtttggccctgatggaagcattggccaaggtctttcctcg
tccgtgcagtcaatgatggatttgaatatcggtgagaatcaggacattgaagtgactgga
acaccagcaaaggaacagcatagcttggaagtaggatcattggttgaggtgaatgaaaat
cctcctctttatggagtaattcggtggattggccatcctctgggagttaatgaacaacta
gctggacttgaacttgaagaagaaagtgtaggctgtacagatggtaccttcaagggattg
cgctacttcacatgtgcatcaaagaaggctttgtttgtaaaacttaaaagctgccggccc
gattcgagatttacatctttgcctcatcacccaaatcagattgaaagatgcaattctatt
gcatttggaggttatctaagtgaaacagtgaaagaaaacacacctcccaaaatggaaaaa
gaaggactggctataatggtcgggaagaaaaggggtnatcaaggacattataattcctgt
tatttagactcaactttgttctgtatgttttcatttagttctgtgttggacacagtgttg
ctcagacctaaagaaaaggatgatgttgaattttataaagatacgcaagatctgttgagg
accgaaatagtcaatccccttcgaaatcatggatatgtgtgtgcaactaaaataatgaaa
ctgcggagaattcttgaaaaagttgaggccgcttcaggatttacttcagaagaaaaagac
cctgaggaatttctcaacatattgtttcatcacatattaaaagttgaacctttgttgaaa
atcaggtcagcgggtcaaaaagtacaagactgttacttttaccagatattcatggacaaa
aatgaaaatgttggggtgccaacgatgcaacaactgcttgaatggtcttttattagcagt
gaccttaaatttgctgaggccccttcatgtctgatagttcagatgcctcgatttggaaaa
gaattcaagatgtttgataaaatctttccatctttggaattggatattacagatttatta
gaagacacacccagagaatgtcgtatttgtggaggtctggctttcgttgaatgcagagaa
tgttatgatgacacagatataactgctggaaaaatcaaacagttctgcaaagcttgtaat
acgcaagtacatctccaccataagagacaaggacataagcaaagaaaagtgtgtctccca
gaacagatggctgactatgcctggagacaatgttgtgtacctagacagaagatgaaactg
tttgcagtgctctgtatagagacgagtcattatgttgcttttgtcaaatatggcccagat
gactcagcatggttgttctttgacagcatggcagatcgagatggtgggcagaatggcttc
aacataccccaagtgtctcagtgtccagagataggaaagtacttaaaaatgtcaccagaa
gatctacatgaattggatccaaaaagtattcatggctttgctcgaagactgttatgcgat
gcttatatgtgcatgtaccagagtcccaccatgagtttgtacaaatag
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