Callorhinchus milii (elephant shark): 103176092
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Entry
103176092 CDS
T03088
Symbol
chd9
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmk03036
]
103176092 (chd9)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103176092 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
HDA2-3
ResIII
DEAD
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
103176092
NCBI-ProteinID:
XP_042196300
LinkDB
All DBs
Position
Unknown
AA seq
2874 aa
AA seq
DB search
MLLEVAKHPHRRPAEVESLHHVSETQKPEKLNFEPLQTFDSLKLHPVNQPFNLVGGSTES
NVLSPHSQFHCSPDHQPNQANGLFPSGHNDNTGQTFVDGSPMWGHQSPISNQNGSPFHTL
QGHSQSMQQMTPFLTRHDFAPHQSSSQQQPPAPVQSQPNMNHFATGQKSLNQGNQFMGVH
GSTSSCMTHIGQPTAAVSTSIQQHPVTVQQFNQPTTATALPVNSVRSVRFTGSASHPGLH
QSVNFSGPSQDMTPCSINSSNQFTSQYSFPNNNLANGNNLTSTTMLSTHRISQTMPCFPA
SDLFTVAAGTNQEAVQHMLNPNSPAKQSVLQPMHSVSTQGNFSPSSVSSVQTGVPITTSP
ASQVKLPNAPTQRKPTTSFLSLQGNAHQQSQARSGLNPEHVFQKQLLTAFGSSSLSQGES
VPVRRSVAPLQLLPNVQQEMVVQQQMRPEAVSATRALSQQWQLSATRQPQRMKGSMQMVL
QRQPPSSQTAADGSTAQAAQIGKLQNAQLMTETKQLKKKDMQNKQEKANRIISEAIAKAK
ARGERNIPRVVNPACLAGVSDRKEDKKSNKIKIKPKDKESKKSKTASCSKSKDKRKISKI
IITLGKKKKRKNESSEDGSDTEQHPTPCVKKESISGYQKRRSNRQVKRKKYNEDTGMKIS
DDEERKAARGKTKTGSNKPAEHSVQLFVENPSEEDAAIVDKIMACRLVKKEVASGHLAEV
EEFFVKYKNYSYLHCEWATETQLSKDKRIHQKVKRFKIKQAQRGHFFVAMDEEPFNPDYV
EIDRILEYSCCEDKDTCEPVVYYLVKWCSLPYEDSTWELKEDVDQSKIEEFERLQQAKPC
LKRVDRPSPPAWKKIEQSRDYKIGNQLREYQLEGLNWLLFNWYNRQNCILADEMGLGKTI
QSITFLCEIFMTGIHCPFLIIAPLSTIANWEREFRTWTDLNVIVYHGSMISRQMIQQYEM
YFRDSEGRILRGTYKFHAMITTFEMILGGCPELNVIEWRCVIIDEAHRLKNKNCKLLEGL
KIMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFSSEATFMQEFGDLKSEEQVQKLQAI
LKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNL
VNTMMELRKCCNHPYLIKGAEEKILGEFRELRRPTAPDFHLQAMIQSAGKLVLINKLLPK
MKAGGHKVLIFSQMVRCLDILEDYLIQKRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFV
FLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYE
REMFDKASLKLGLDKAVLQSMNGRENSVGGIQQMSKKEIEDLLRRGAYGAIMDEEDEGSK
FCEEDIDQILMRRTKTITIESEGRGSTFAKASFVASGNRSDIALDDPNFWQKWAKKAEID
LEAIHGRNSLVIDTPRVRKQTRPYNAAKDESAELSEAESDGEDKPKLRRLCDRAHGYGRT
ECFRIEKNLLIYGWERWKDILSHGRFKRRLVEQDVETICRALLVYCLVHYRGDEKIKSFI
WDLITPTENGQTKELQNHLGLSAPVPRGRKGKKVKTQXSTFDMQAEWLRKYNPEHLLQDD
GYKKHLKHHCNKVLLRVRMLYYLKQEVIGDQLEKVLDGVDAGEIDIWVPEPEQSEIPADW
WDADADKSLLIGVFKHGYEKYNTMRNDPALCFLERVGKPDEKAIAAEQRGNDTFADGAEG
DGEDPEYKPAQPLFKDEMEDAASSPGDLMITDDPLGNGDLLYWPLPSALTTRLRRLVTAY
QRSTKQELVKQEAQTKGDKRRRLCEDTVKAKEAAKIEKQQRWTRREEADFYRVVSTFGVV
YDPDKQTFDWTKFRAIARLNKKTDESLQKYLYAFTAMCRRVCRLPPKEKEELFDPPIFIQ
PITEERASRTLYRIELLRKVREQVLRHTQLDERIKLCQPSPDLPEWWENGKHDKELLTGA
AKHGISKTDYHIFCDPELSFMLAQRNFSQSRVTQSRSSTPLLHHQYQSLPSPLQVQLKQQ
EKKSHCEPETVKCEKAADVKKEPRSSDDEEPVRAEVKSKLKSDHWSASDGFQVHHKLDPK
TGIKMETDLDGHMVAARTQPLTPNSVFNKRKHKRRGSDPSSDSDSDSDNSSTSSPSSSSS
SSRSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSDDSDSDSNDKHTKASCKAPQ
HLKTFDEDSVASLSITHDETQDSFLPDGGKPDIQFLQERHRFAASCWPKDRVIINRIDSI
CHLVLKGHWIPSRRSYDYNAVTSSYTTKLLDSPSATGDFSDTAIVTSGSHSIKEDNSLLS
QFTKVKKHVREKEFTVKINDEGGLKLTFQKQRLTQKRALETEEGTSDQQHYMAQLHDLYS
TSDNSQEMAVDLSKSLLVASSSAPLSSSVLFNANLSGNTPGPIPHPKSAGTSHQISRHCT
NGAFMDGQPIIKKKRGRKKNVEGIDILFMNRNKALQHKTDRSEILGERPKQKRHRCRNPN
KIDVKSLTGEERVPVINRRNAKKVGGSLAPAIKDLGRWLQENLDFGIAPEWADVVKQSGY
LPESMFDRILTGPVVREEVSRRGRRPKSELTKAAAVAAAAMTVNPLVTNGLLAGMDLTSL
QSLQQNLQNLQSLQLTAGLMGFPGALQSTGGLQSTAGDNKTLASMFPMMLSNMTGLPNLF
GMGGLLNKPSDTGHGDKKGSGNTDFKPTDGTNERTEKQNVDSCCEISVSSCSSTSSPKKI
TPATSASASAASSNPLAINPLLLSSMLYPSILLPPGLNLSVPGFSQTNRFDVQTDKSTAG
TTSKPAEETAEQQERTEQNTSQENSGDDGSEKEASLSTSDDTTHPDDSDSSEED
NT seq
8625 nt
NT seq
+upstream
nt +downstream
nt
atgcttttagaagttgcaaaacatccccatcgcagaccggctgaggttgagtctctgcac
catgtatcggaaacacagaaaccagagaaacttaacttcgaaccattacaaacatttgat
tcattgaaacttcatccagtgaatcagccttttaacctggtgggtggcagtactgaaagt
aatgtcctttccccacattcccagtttcactgttcacctgaccatcagccaaaccaggca
aatgggttattcccatctggccacaatgataataccggacaaacatttgtggacggaagc
ccaatgtggggtcaccaaagccctatttcaaatcaaaacggatcgccgttccacacactg
caaggacattctcagtctatgcaacagatgacgccttttttaactcgccatgattttgca
ccgcatcagtccagttcacagcagcaaccgcctgcaccagtgcagtctcaaccgaatatg
aaccattttgccacgggacagaaatctctaaatcaaggcaatcaattcatgggtgtccac
ggttcaacgtcatcgtgtatgactcacataggccaaccgactgcagctgtgagtacatcc
atccaacagcatccagttacagtacaacagtttaaccagccaacaacagcaacagccctg
cctgtgaattcagttcgctctgttagattcactggtagtgccagccaccctggattacat
cagagcgtgaacttttcagggccatcccaagacatgactccttgctcaatcaacagttca
aaccagtttacttctcagtattcctttcctaataacaacctagctaatggcaacaatctg
acgtccactacaatgctttctactcatcggatatcccagactatgccttgcttcccagcg
agtgatctgttcacggtggcagcgggcaccaaccaggaggcagttcaacatatgctcaat
cccaacagtcctgctaaacaaagcgttcttcagcctatgcattctgtaagcactcaggga
aactttagtccttcaagtgtgtcctcggttcagactggcgtaccgataacaactagccct
gcttctcaggtgaagcttcctaatgcgccgacacaaaggaaacccacgactagcttttta
tctcttcaaggaaatgcacaccagcagtcgcaggctcgctcgggactgaatccggaacac
gtttttcagaagcaactattgacggcgtttggtagttccagccttagccagggggagtcc
gtgcctgtccggaggtcggtggcccctctgcagctgcttccaaatgtgcaacaggagatg
gttgtccagcagcaaatgcgaccagaggcagtttctgccacccgggccctgtctcagcaa
tggcaactgtctgcgactcgtcagcctcagcggatgaagggttccatgcagatggtctta
cagcggcagcctccttcctctcagactgctgctgatggttccactgcacaagccgcacag
attggcaagttacagaatgcacagttgatgaccgaaaccaaacagctgaaaaagaaggat
atgcagaataagcaagagaaagccaatcgcatcatatccgaggcaattgcaaaggccaag
gcacgtggggagcggaatattccccgagtggtcaaccctgcctgtttggctggtgtatct
gatcggaaagaggataagaaatccaacaagatcaaaataaagccaaaggataaagaatca
aaaaagtccaaaactgcttcttgctctaaatcaaaggataaacgaaaaatcagcaaaatc
attatcacattgggcaagaaaaagaaaaggaagaatgaatcgtctgaagacgggtctgat
actgagcaacatcccacaccgtgtgtaaagaaagaaagcatctccggatatcaaaagaga
cgttcaaatcgacaagtaaaaaggaagaaatataatgaagatactggaatgaagatctcg
gatgatgaagaaaggaaagctgctagggggaaaaccaagactggctcaaataaaccagct
gagcattctgtacagttgtttgtggaaaaccccagtgaagaagatgctgcaattgtggac
aagattatggcttgcagactcgtgaaaaaagaggtggcctctggacatctggctgaggtt
gaagaatttttcgttaaatacaaaaactactcctatttgcattgtgagtgggccacagaa
actcaactgtcgaaagacaaaaggatacatcaaaaagtgaaacgcttcaagattaaacag
gcgcagagaggccatttctttgtagctatggatgaagaaccttttaatccagactatgtt
gaaattgatcgaatactggaatactcatgttgtgaagacaaagacacttgtgagcctgtt
gtttattatttggttaaatggtgctcattgccatatgaggatagtacatgggagctaaaa
gaagatgtagatcaaagcaagatcgaggagtttgaacggctgcaacaagctaagccttgc
ctaaagcgtgtggatcgaccgtctccccctgcttggaaaaagattgaacaatctcgggat
tataaaattggcaatcagctcagagagtatcaactggaaggactaaactggctgcttttc
aattggtataacaggcaaaactgcatccttgcagatgagatgggtttaggtaaaaccatc
cagtctattacattcctttgtgaaatatttatgactggcatccattgtccctttctgatc
attgcacctttgtctacgattgcaaactgggaaagagaatttcgcacatggacagacctg
aatgtcattgtttatcatggcagcatgattagtaggcagatgattcaacaatatgaaatg
tacttccgggactcagagggccgcatccttcggggaacatacaagttccatgcaatgatc
acaacctttgagatgattctcggaggctgtccagagctgaacgtgattgaatggcgttgt
gtgatcatcgatgaagcccacagactgaaaaacaaaaactgcaaactgctggagggattg
aaaatcatgaatctggaacacaaggtgcttctgaccggaacccctctgcagaacactgtg
gaagagttgttcagtttgcttcatttcctggagcctttgcgtttttcatcagaagccaca
ttcatgcaagagttcggggacttgaagagtgaagaacaggtgcaaaagcttcaggcgatc
ctgaagcccatgatgctgcgacgtctgaaggaggatgtggaaaagaagttggctcctaaa
gaagaaactattattgaagtcgaactcaccaatattcagaagaaatactatcgggcaatc
ctagagaaaaactttgccttcttatccaaaggcgccggtcaggcaaatgtgcccaactta
gtcaacactatgatggagctaaggaaatgctgtaatcacccctatcttataaaaggtgct
gaagagaagattcttggagagttcagagagctccgcagaccaaccgccccagattttcat
ctgcaagcaatgattcagtcagctggtaaattggtcttgatcaacaagctgcttcctaag
atgaaagctggaggtcacaaggtactcattttctcccagatggtgcgctgcctggacata
ctcgaggattacctcatccagaaaaggtatccctacgaacggattgatggaagagtccgg
ggaaatctacggcaagcagcaattgaccggtttagcaagcctgactctgatagatttgtt
ttcctattgtgcacgagagctggtgggctgggcattaatctgactgcagcggatacatgc
atcatttttgattctgattggaaccctcagaatgatcttcaggctcaagctcgatgccat
aggatcggtcagaacaaagcggtgaaggtttacaggctaataacacgcaactcgtacgaa
cgggagatgtttgataaagccagccttaagctaggtctcgacaaagctgtgttacagagt
atgaacggaagagaaaatagtgttggtgggatacaacaaatgtctaagaaagaaatcgaa
gacttgcttcgaagaggtgcttacggtgcaattatggatgaggaagatgagggctccaaa
ttttgcgaagaagacattgatcagatcctcatgcgacgtacgaaaaccattactattgaa
tctgaaggaagaggctcgacatttgctaaggcaagctttgtagcttctggcaacagaagt
gacatcgctctggatgaccctaatttctggcaaaaatgggccaagaaagcagaaatcgat
cttgaagctattcacggaagaaatagcttggttattgacactccaagggtaagaaaacaa
accaggccgtacaatgctgctaaggatgaatcggcagaactatctgaagcagagagcgat
ggagaggataaacccaaactgcgtagactatgtgaccgagctcatggatatggtagaaca
gaatgcttcagaattgagaaaaacctgctaatttatgggtgggagcggtggaaagatatt
ttatcgcacgggcggtttaagagacgcctggttgagcaggatgtggagacaatctgccgt
gccctcttggtatactgcctcgttcactacagaggtgacgaaaagataaagagctttatt
tgggacctcattaccccaacagagaatggacagacaaaggaactgcagaaccatctaggt
ctgtctgcaccagttccaaggggccgaaaggggaagaaagtgaagactcagngaagcact
tttgacatgcaggccgagtggctcaggaagtacaacccagagcacctactgcaggacgat
ggctacaaaaaacatctaaaacaccactgcaataaagttcttctgcgggtgagaatgttg
tattacctgaagcaagaggtaatcggtgatcagctggagaaggtgcttgatggtgttgac
gctggcgagattgacatttgggtgccagagcctgagcagtctgagattcctgctgactgg
tgggatgcagatgctgacaagtcgctgctcattggtgtcttcaagcacggttacgaaaag
tataacactatgcgcaatgacccagcactgtgtttcctggaaagggttggcaaacctgat
gagaaagcaattgcagcagaacaaagggggaacgatacctttgcagacggtgcagagggg
gatggtgaagatccagaatataagccagcacagccattattcaaggatgaaatggaggat
gctgcatcatctcctggggatttaatgattacagacgatcctttggggaatggtgatctg
ctctactggccgcttccgtctgctttaacaacacgtctgcgccggctcgtaaccgcgtat
cagcgcagcaccaagcaagaactggtcaaacaggaagcccaaaccaaaggggacaagaga
aggcgactgtgcgaggacactgttaaagcgaaggaagctgctaagattgagaaacagcaa
aggtggaccagacgagaagaggctgacttttatagagtggtgtccacttttggtgtcgtt
tatgatccagacaagcagacatttgactggaccaaattccgagctattgcaaggctaaat
aagaagacagatgagagtctgcaaaagtacctttatgctttcactgccatgtgtagacga
gtctgccgtttaccaccaaaagagaaagaagaacttttcgacccacctattttcatacaa
cctattacagaggaacgtgcctctcggacattgtatcgcattgagctgctcaggaaagtg
cgagagcaagtgcttcgccatacacaacttgatgagaggataaaactttgccagcctagc
ccagacctgcctgaatggtgggagaacggaaagcacgataaggaattgctcactggagca
gccaagcatggcatcagcaagacagattatcatattttctgtgatccagagctttcattc
atgttggctcaaaggaatttcagccagagcagagttacccagtcaaggagctccacacca
ctcctgcaccatcagtaccagtcattgccgtcgcctcttcaggtgcagctcaagcaacag
gagaagaaaagccactgtgagcctgaaactgtaaaatgtgagaaagcggccgacgtgaaa
aaggagccgcgttcgtccgatgacgaagagcccgtgcgagctgaagtcaaaagcaaattg
aaatccgatcactggagtgcctcagacggctttcaagtccatcacaaattagacccgaag
actgggattaaaatggaaaccgatttggacggccacatggttgcagcaaggactcagcca
cttacaccaaactctgtgttcaacaaacggaaacacaagcggcgaggctcagatcccagc
tcggattcagactctgattcagacaactcgtcaacttcgtcaccttcctcatcatcttct
tcatcgcggtcatcgaactcttcatcttcttcatcttcctcctcgtcctcatcctcctct
tcctcttcctcctcctcgtcctcttcatcatcgtcctcgtcatcttcctcgtcctcgtct
gatgacagtgatagcgacagcaatgataaacacaccaaggcaagctgcaaagcaccacag
cacttgaagacctttgacgaagatagtgtagcatctctcagtatcacgcacgatgagaca
caggacagctttctgccagacggtggaaaacctgacattcagtttttgcaagaaagacac
aggtttgctgcctcctgctggccaaaggatcgagtaataatcaacagaattgatagcata
tgccacttagtgctgaaagggcactggattccatcaagaagaagttatgattacaacgct
gtgacctcctcttatacaacaaaattactcgatagcccttcagccacaggagatttcagt
gacaccgcgattgtaacatcaggaagccatagtattaaagaagataattctcttttgtcg
cagttcacaaaggtgaagaagcatgtgcgagaaaaggagtttacagtgaaaatcaatgac
gaaggtggattgaagttaacttttcagaagcaaaggctcactcagaagagagcacttgaa
acagaagaaggaacttcagatcagcagcattacatggcacagctgcatgatttgtattct
acttctgataacagccaggagatggctgtagacctttccaaatctttgctggtagccagc
agctctgctcctctctcctcctcagtgttattcaatgctaacttatctggtaacacccct
gggccaattcctcatcctaaatcagcaggtacttctcatcagatatccagacactgcaca
aatggagcattcatggatggccagccaataattaagaagaaaagaggaaggaaaaagaac
gtggaaggcatagacattctttttatgaatcgcaataaagcacttcaacataaaacagat
agatctgagattttgggggaacgaccaaagcaaaaaaggcatcggtgccgaaatcctaac
aaaatagatgtgaaaagcctgactggagaagaaagagtgccagttataaacagaagaaat
gccaaaaaggtgggtggctcactggctcctgcaatcaaagacctgggcagatggctgcaa
gaaaatctggattttggaattgcaccagaatgggccgatgtagtgaagcagtcgggatac
ctgccagaaagcatgtttgatcgaatcctcacagggcctgtggtacgggaggaagtgagt
cggagaggccgacgtccaaaaagtgaactcaccaaagcagctgctgtggctgccgcagcc
atgacagtcaaccccttagtaactaatggactccttgctgggatggacctaaccagcctc
cagagcttgcagcaaaaccttcagaacctgcaatctctgcagctgacagcggggttgatg
gggttccctggagctctccaatccaccggcggtctccaatccaccgcaggagacaacaaa
actctggcttcaatgtttccgatgatgctttctaatatgacggggttgcccaacctgttt
ggcatgggaggcttattaaataaaccttcagacactggtcatggggataaaaagggaagc
ggaaacacagacttcaagccaacagatgggacaaatgaaaggacagaaaagcaaaatgtg
gacagttgttgtgaaatctctgtgtcgagctgttcttctacttcctctcctaagaagatt
accccagccacaagtgcttctgcatcagcagcatccagcaatcctcttgctattaatcca
ctgctgttgtccagcatgctttatccaagcatacttctccctccaggccttaacctatct
gtcccaggtttttctcagaccaataggtttgacgtacagactgataagagtacagctgga
accacgtcgaagcctgccgaagagacagcggaacagcaagagcgaacagagcagaacacg
tcacaggaaaacagcggcgatgatggatccgagaaagaagcatctttatccacaagtgac
gatacaactcatccagatgattctgattccagtgaagaagactga
DBGET
integrated database retrieval system
