Callorhinchus milii (elephant shark): 103176100
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Entry
103176100 CDS
T03088
Symbol
irx6a
Name
(RefSeq) iroquois-class homeodomain protein IRX-6a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmk03000
]
103176100 (irx6a)
Transcription factors [BR:
cmk03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
103176100 (irx6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
POTRA_TamA_1
Motif
Other DBs
NCBI-GeneID:
103176100
NCBI-ProteinID:
XP_007887677
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MVTKGAAMSFPQFGYPYNATSQFFVSASPSSTCCESGSRTGSEGSTGAAQAAICCPSYDN
RLLANARTEINAAAAALGMYSSPYATAASQSYGNYLTYSTDPSALYSSLNSQYEIKDGTG
SLHSGIAQPAAYYPYDHSLGQYQYDRYGTMDFNGSTRRKNATRETTSTLKTWLYEHRKNP
YPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPRNKGGDEKKEEGEKRDEE
EYDTDNDPKECREEKELRLSDLDDLEDDEPEEKLESDQDKPPTGLGLRRGLVETEKTDCN
VSPPSDHHTFCSRNTSTLESEFLETIANKPTVSVTAPPSLPQRFETAEKPRIWSLAHTAA
SHALVASQLDQPRTGRYCSDARPAHGSGSHQADDGIALGDSSQAAQILRTSAFNLQTLVA
TGQLHCASYPVLDNCQFTTGSEGFLRNVKSDLGSADISEACLLHQQEKVRTAFRPVLKRF
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaaaaggagcagcgatgtccttccctcagttcggatacccatacaacgcgact
tcacagtttttcgtgtcagcaagtcccagctcgacgtgttgcgaatccggctccagaact
ggatctgaaggctctacaggggcggcccaggctgccatttgctgtccttcctatgataac
agactgctggccaacgccaggactgagatcaacgcagctgctgcggctctgggcatgtac
agctctccctatgcaactgcagccagccagagctatgggaactaccttacatacagcaca
gacccctctgctctctactcctcactgaattcccagtatgaaattaaagatggcactggg
agtttgcactcgggaatagctcaaccagctgcctactatccatacgatcattccttgggg
cagtatcagtacgacaggtacggtaccatggacttcaatggctcgactcgacgaaaaaat
gcgactcgagaaaccacaagcactctgaagacttggttgtacgagcacaggaagaacccc
taccccaccaaaggcgagaaaatcatgttggccatcatcaccaaaatgactctgactcaa
gtgtccacctggttcgccaacgccaggaggaggttgaagaaggagaacaaaatgacctgg
tcacccagaaacaaagggggagacgagaaaaaggaggagggcgagaagagggatgaagag
gaatacgacacagataacgatccaaaggaatgcagggaggagaaggagttgaggctgagc
gacctggacgatttggaagacgatgagccggaggagaaacttgagagcgaccaggacaag
ccaccaaccggcctgggtctgaggagagggctggtggagactgagaaaactgactgcaac
gtgtcgcctccgagcgaccatcacaccttctgctcgaggaacacttccaccctggaatcc
gagttcctggagactattgcaaacaagccaactgtttctgtgacagccccccccagcctg
ccccagcgctttgagacggcagagaagccaaggatttggtctctggcgcacacggcggct
tctcacgccttggtggcttctcagctggaccagccccggacagggagatactgctcggac
gccaggccggcccatggctcggggagccaccaggcagacgatgggattgctcttggagac
tcttcgcaagcagctcagatcctgagaacttctgctttcaacttgcaaacgcttgtggcc
acgggtcaactgcactgcgcttcctaccccgtgctggacaactgccagttcacgacaggg
tctgaaggatttttgagaaatgtgaaatctgatctgggatcagcagatattagtgaggcg
tgtcttttacatcagcaagagaaagtgcgaacggccttcagacctgtgctgaagaggttt
gtttaa
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