Callorhinchus milii (elephant shark): 103176122
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Entry
103176122 CDS
T03088
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmk03000
]
103176122 (ctcf)
03036 Chromosome and associated proteins [BR:
cmk03036
]
103176122 (ctcf)
Transcription factors [BR:
cmk03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103176122 (ctcf)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103176122 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_jaz
zf-met
zf-C2HE
zf-C2H2_6
HMBD
Motif
Other DBs
NCBI-GeneID:
103176122
NCBI-ProteinID:
XP_042196205
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MATESENVTVEESEMFTKVKEHKTYQRRREGGQQEDSDGQQKEPEGGEVVQDVNSNMQVV
MMQPLDTTLLQMKQPIEGTTHESETVDDTQIITLQVVNMEEQPINLGELQLVQVAQSSID
ELQGNYENEAPKDELQEVEPVICHTLPLPEGFQVVKVGANGEVETVEDGAIQVQDDDASS
GPWQKDPDYQPPVKKVKKKKNKLRYKVDDSKDVDLSVYDFEEEQQEGLLSEVNVEKAVGT
MKPPKPMKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTL
LRNHLNTHTGTKPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQ
KHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYLESGKKCRYCDAVFHERYALIQHQKS
HKNEKRFKCELCDYACKQERHMVMHKRTHTGEKPYSCSKCEKTFRQKQLLDMHFKRYHDP
NFIPASFVCSKCGKAFTRKHKHLCNIPLQNTMTKHAENCSGPGNDGEDVVERKKGKGRGR
KRKMQSKRGDSSDSEDNAEPELDGDDDDDDDGDDESVEIEPEIEESEELPVEETVPPPPA
KKRRGRPPGKVIQSNKSSGADPVDQASTTIENIIVEIKKEPDADDVQVQAGIEAQNGDIT
PEMILSMMDR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagagtcagaaaatgttactgtggaggagtcggagatgtttacgaaggtcaaa
gaacacaagacctatcaaagacgtcgagaaggtggacaacaagaagattctgatggacag
cagaaagagccagagggtggtgaggtagtacaagatgtgaacagcaacatgcaagtggta
atgatgcagcctttggacactacactactccaaatgaagcagccaattgagggcactact
catgaatcagaaactgtggatgacacacagattattacgctgcaggtagtgaacatggaa
gagcagccaataaatcttggtgaattacagctggtgcaagtggcccaaagcagcattgat
gaactccagggaaactatgaaaatgaagcccctaaagatgaacttcaggaagtagagcct
gtaatatgtcacacccttcccctaccagaaggctttcaggttgtgaaagtgggtgccaat
ggtgaggtggagacagtagaagatggagcaatacaagtacaggatgatgacgcttcttct
ggtccttggcaaaaggatcctgattaccaaccaccggtcaaaaaagtcaaaaaaaagaag
aacaaactgcgttacaaggtggacgactccaaagatgttgatttgtctgtttatgacttt
gaggaggagcagcaggagggattgctttcagaggttaatgtggagaaggccgttggtaca
atgaaacctccaaaaccaatgaagataaaaaagaaaggcgtaaagaagacattccagtgt
gagttgtgcagttatacttgtccaaggcgttctaacctagatcgtcacatgaaaagccac
actgatgaacggccgcataaatgtcatctctgtggtagagcttttcgaacagtgactctg
ctgagaaaccatctcaacacgcacacaggtactaaaccacataaatgtcctgactgtgat
atggcatttgtgactagtggagagttggtaaggcaccgtcgttacaaacacacccatgag
aagccattcaagtgctctatgtgtgactatgccagtgtggaggtaagcaagttaaagcgc
cacatccgttcccacactggagagcgtccattccaatgtagtctgtgcagctatgccagc
agagacacctacaaactgaaaaggcacatgaggacccactctggtgagaagccatatgaa
tgctacatctgccacgctcgtttcactcagagtggcacaatgaagatgcacattttacag
aagcacacagagaatgtggctaaatttcactgtccgcattgtgacactgttattgccaga
aaaagtgatttgggtgtccatctgagaaaacagcattcctatctcgagtccggcaagaag
tgtcgttattgtgatgccgtgttccatgagcgatatgccctcatacagcaccaaaaatct
cacaagaatgagaaacgcttcaaatgtgaactttgtgactatgcatgcaaacaggaacgt
cacatggtgatgcacaagaggactcatactggagagaaaccttattcgtgcagcaaatgc
gaaaagacctttcggcagaagcaactcctggatatgcacttcaaacgttaccatgaccca
aattttatccctgcttcttttgtgtgctcaaagtgtgggaaagcatttactcgtaagcat
aagcatttatgcaacatacctttgcagaacacaatgactaaacatgcagagaattgctct
gggccgggaaatgacggtgaagatgttgtggaacgcaaaaaggggaagggacgcgggagg
aaacggaaaatgcaatcgaagagaggcgactcttctgatagtgaggataatgcagaacca
gaacttgatggagacgacgatgatgatgatgatggagatgatgaatctgttgagattgaa
ccagagatagaagaatctgaggaattgccagttgaagaaactgtcccacctccgccagcc
aaaaaacgaagaggcagaccacctggcaaagttattcagtccaataaaagttcaggagca
gatccggtagatcaagcaagtacaactattgaaaacatcattgttgagataaaaaaagaa
ccggatgctgatgatgtgcaggtgcaagcgggcatcgaggcccagaatggagatattaca
cctgagatgattcttagcatgatggaccggtga
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