Callorhinchus milii (elephant shark): 103176393
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Entry
103176393 CDS
T03088
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-5
KO
K06588
integrin beta 5
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04145
Phagosome
cmk04148
Efferocytosis
cmk04510
Focal adhesion
cmk04512
ECM-receptor interaction
cmk04810
Regulation of actin cytoskeleton
cmk04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103176393
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103176393
04148 Efferocytosis
103176393
09144 Cellular community - eukaryotes
04510 Focal adhesion
103176393
09142 Cell motility
04820 Cytoskeleton in muscle cells
103176393
04810 Regulation of actin cytoskeleton
103176393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmk04131
]
103176393
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmk04515
]
103176393
Membrane trafficking [BR:
cmk04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
103176393
Cell adhesion molecules [BR:
cmk04515
]
Integrins
Integrin beta subunits
103176393
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
HemY_N
DUF2975
Motif
Other DBs
NCBI-GeneID:
103176393
NCBI-ProteinID:
XP_007888079
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MLTHSAVVYLFLFSPVCRPFAQNVRGLNTCTSGHATSCRDCLLIHPDCGWCVDEEFGHKG
TISSRCDFRDNLIERGCRKQFIESPQSSIRIXKKLPLSHKGSGSTQSDVIQLTPQKIALS
LRPDAETTFRMKVRQVEDYPVDLYYLMDLSLSMKDDLDNIRVLGTTLSREMAKLTSNFRL
GFGTFVDKPTSPFSYTGSKYQNNPCLGYKLFPQCVPSFGFRHLLSLTDKSDKFNAEVQKQ
LVSRNRDAPEGGFDAILQAAVCKEKIGWRKEASHLLVFTTDDVPHIALDGKLGGLVQPND
GQCHLEEINESYEYSASTQMDYPSLALLGEKLAENNINLIFAVTQTHYILYKNYTRLIPG
TTVEILDKDSKNIIQLIVNAYSSIRSKVELTVWEQPEDINLSLTATCQDGVSRPGERKCG
DLKIGDTVSFDVTVKARSCPDYPTRNSFTIKPVGFKDSLNITVSYDCSCDCMSQVDVNSS
KCNSNGTYECGICKCDPGFLGSKCECEEGVTSVVSHSLCREAEGKSICSGRGECSCNRCV
CYESEFGRIYGTFCECDDFSCARHKGILCSGHGECQCGECRCQAGWIGDNCNCSTQTNSC
LSNDGQVCSGRGNCICGQCVCAEPGAFGNTCEKCPTCPDACGTKRECIECRLFNSGRLAD
NQTCQRHCKDEILTVDVLKTDEENAVLCLYKTENDCVMRFTYSEHVSGKSILTALKEPEC
ASEALSVSVLLAVVGIILAVGIVLLAIWKLIVTVHDRREFARFQSERSRARYEMASNPLY
RQPITTHNVETVSTMHNKSYNGIVE
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgctcacacacagtgcggtggtgtatctgttcctattctctcccgtttgccgtccgttc
gcgcagaatgtgagaggtctcaacacgtgtacaagtggacatgctacctcgtgccgcgat
tgcctgcttatccaccctgactgcggctggtgtgtggacgaggaatttggccacaaggga
accatctcttcaagatgtgactttagggataacttgattgaaagaggatgcagaaagcaa
tttatcgagagccctcaaagcagtatacggattngaaagaaacttcctctcagccataag
ggatcaggatccacacaatctgatgttattcaactaactcctcagaagattgctctcagt
ctaaggccagatgcagagaccacgtttcgaatgaaggtgcgtcaggtggaggattacccg
gtggatttgtactacctgatggacctttcactctccatgaaggacgaccttgacaatatc
cgggtgttgggcactacactctctcgggagatggcgaagctcaccagcaacttccgtctc
ggctttgggacgtttgtggacaagcccacatcaccgttttcatacaccggatccaagtat
cagaacaacccatgtctagggtataagttattcccacaatgtgtcccgtcctttggtttc
cggcaccttctgtcactgactgacaagtccgacaaattcaacgcagaagtccagaagcag
ttggtgtcaaggaaccgcgatgccccagaaggtggctttgatgctatcctgcaagcagct
gtctgtaaggaaaaaatcggctggcggaaggaggcttctcacttgctggtgttcacaaca
gatgatgtccctcacattgccctggatggcaagcttggtggcctggtacaacccaatgat
gggcaatgtcacctcgaagagattaatgagagctatgaatatagtgcctccacacaaatg
gattacccatcacttgccctccttggagaaaagctggcggagaacaacatcaatttgata
tttgccgtgacccagacccactatatactctacaagaattacactcgtctaattcctggg
acaacggtggaaatccttgacaaagattcgaagaatatcatccagctgattgtaaatgct
tacagtagtatccggtctaaagttgagctcaccgtatgggaacaaccagaagacatcaac
ctgtccttgacagccacgtgtcaagatggtgtttcccgccctggggagaggaagtgcggt
gacctgaagatcggggacactgtgtcctttgacgtgaccgtaaaagcgaggagttgtcca
gactacccgacaagaaacagcttcaccataaaacccgtcggcttcaaagactcgttgaac
ataacagtcagctatgactgcagctgtgactgcatgagccaggtagacgttaacagctcc
aagtgcaacagtaatgggacctacgagtgtgggatctgtaagtgtgaccccggctttctg
ggaagcaagtgcgagtgtgaggagggagtgaccagtgtggtgtctcactctctgtgccgg
gaggcggagggcaagtctatctgcagtggcaggggagagtgcagctgtaaccgctgcgtc
tgctacgaaagcgagtttgggaggatttacgggacattctgtgaatgtgatgacttttcg
tgtgcaaggcacaagggcatcctctgctcaggtcatggggagtgccagtgcggtgaatgc
cgatgccaagccggctggatcggggacaactgtaactgctcgacgcaaaccaactcatgt
ctctccaacgacgggcaggtctgcagcggccgaggcaactgcatctgcggccaatgtgtt
tgtgctgaacctggcgcctttgggaacacttgtgagaaatgcccgacatgtccagatgcc
tgtggcacgaaaagggaatgcattgagtgcagactgtttaactcaggaagactggctgac
aatcaaacctgtcaaagacactgtaaggatgagatcttgacggtggacgtgctcaaaaca
gatgaggagaatgcagttctgtgtctgtacaagaccgaaaatgactgtgtgatgagattt
acctactccgaacacgtcagtgggaaatctattcttactgccctgaaagaaccagaatgt
gccagcgaggctctgtcagtgtcggtcctgctggcggtggtggggattatcctggctgtg
ggcatcgtcttgctcgccatctggaagttgattgtcacggtccacgataggcgggagttt
gccaggtttcaaagtgagcgttccagagccagatacgagatggcaagcaatcctctgtac
cggcagcccatcaccactcataatgtggagactgtttcaactatgcacaacaaatcttac
aacggtatcgttgaatga
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integrated database retrieval system
