Callorhinchus milii (elephant shark): 103176446
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Entry
103176446 CDS
T03088
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04145
Phagosome
cmk04814
Motor proteins
cmk05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103176446
09142 Cell motility
04814 Motor proteins
103176446
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103176446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmk03036
]
103176446
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cmk04812
]
103176446
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
103176446
Cytoskeleton proteins [BR:
cmk04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
103176446
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML
WDR55
Dynein_IC2
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
103176446
NCBI-ProteinID:
XP_042192280
UniProt:
V9KAN3
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MSDKDKSELKAELERKKQRLAQIREEKKRKEEERKRKEADQKKEVVQNEELDIEKKRREA
DALLQSMGITSEPSIVPPTSPSSKSVSTPSEAGSQDSADGTLGARRAVKLGMAKIMQVDF
PPREIVTYTKETQTPVAAQTTEEENEEQEEIAAPKAAVEPEQEKLVQKEEDKEGAARELS
EEEKLQIIHSDEFAIFFDHSTRIIERALAEHKDLFFDYSGKDLEEKEGELQGGTKLSLNR
SFFDERWSKHRVVTCMDWSPQYPELLVASYNNKEDAPHEPDGVALVWNMKFKKPTPEYIF
QCQSSVMSVSFARFHPNLVVGGTCSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNV
VGSQNAHNLISVSTDGKICSWSLDMLSQPQDSIELMHKQSKAVAVTCMSFPLGDVNNFVV
GSEEGSVYTACRHGSKAGISEIFDGHQGPITGIHYHTAAGPVDFSHLFITSSFDWTVKLW
TTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASVTVNS
NPALNRVRWAQSGREIAVGDSEGQILIYDVGEQIAVPRNDEWTRFARTLAEINANRADAE
EESLA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaagacaagagtgagctcaaagcagaactagagcgtaaaaaacagcgcctg
gctcaaatcagagaggaaaagaagaggaaagaagaggagagaaagagaaaagaagctgat
cagaaaaaagaagtggtacagaatgaagaactggacattgagaagaaacgcagggaagct
gatgccttgctacagagcatgggtataacatccgagccctctattgtccctcctacgtct
ccttcctcgaaatcggtgagtacaccaagtgaggctggaagccaggactccgctgatggc
actcttggggcaagacgagcggttaaactggggatggcaaaaatcatgcaagtagatttc
cctccacgagagattgtgacgtatacaaaggaaactcagacaccagtggctgcacagaca
actgaagaagaaaatgaagagcaagaggaaattgcagcacctaaagccgcagttgaacct
gaacaagagaaactagtacagaaagaagaagataaagaaggtgcagcacgggaactctcg
gaagaagaaaaactacaaattattcactctgatgaatttgccatcttctttgatcatagc
acccgaataattgaacgggctcttgcggaacacaaagacttgttctttgactacagtggc
aaggatttagaagagaaagaaggagaactccagggaggaacaaaactttctctgaatagg
tctttttttgatgagcgctggtcaaaacatcgtgttgttacatgcatggattggtcacct
cagtatccagaactgcttgttgcctcatacaataacaaagaagatgccccccatgagcca
gatggtgtagctcttgtgtggaacatgaaatttaagaaacccaccccagagtacatcttc
caatgccagtcatctgtgatgtcagtgtcctttgcacggttccatccaaacctagtagtt
ggaggaacctgctctggtcagattgtcctgtgggataatcgcagcaacaagaggacacca
gtgcaaagaaccccactctctgctgctgctcacacgcatccagtgtactgtgtgaatgtg
gttggctctcaaaatgctcataacttgatcagtgtttctactgatggcaagatctgctcg
tggagtctggatatgctttctcaaccacaggacagcattgagttgatgcacaagcagtct
aaggctgttgctgtcacttgcatgtccttcccattgggtgacgtgaacaactttgtggtt
ggtagtgaggaaggctctgtttacacggcctgtcgtcatggaagcaaagctggcattagt
gagatatttgatggtcatcaaggaccaatcacaggtatccactaccataccgcagcaggc
cctgtcgacttctctcacctcttcatcacctcctccttcgattggacagtcaaactgtgg
accactaagaacaacaagccgttatattcgtttgaagacaactctgattatgtttacgat
gtcatgtggtcccctacccaccctgccttgtttgcttgcgttgatggaatgggacgcctt
gatttgtggaatctcaacaatgacacagaagtgcctactgcaagtgttacagttaatagc
aatcccgcactgaatcgtgtgagatgggcacagtctggaagagaaattgctgtgggtgat
tcagaagggcaaatactgatttatgatgttggagagcaaatagcagttcctcgaaatgat
gaatggacacgtttcgctcgaacacttgcagaaataaatgcaaacagagctgatgcagaa
gaggagtccctggcatga
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integrated database retrieval system
