Callorhinchus milii (elephant shark): 103176450
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Entry
103176450 CDS
T03088
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04382
Cornified envelope formation
cmk04510
Focal adhesion
cmk04512
ECM-receptor interaction
cmk04514
Cell adhesion molecules
cmk04810
Regulation of actin cytoskeleton
cmk04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103176450
04514 Cell adhesion molecules
103176450
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103176450
09142 Cell motility
04820 Cytoskeleton in muscle cells
103176450
04810 Regulation of actin cytoskeleton
103176450
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103176450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmk04147
]
103176450
04515 Cell adhesion molecules [BR:
cmk04515
]
103176450
04090 CD molecules [BR:
cmk04090
]
103176450
Exosome [BR:
cmk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103176450
Exosomal proteins of breast milk
103176450
Cell adhesion molecules [BR:
cmk04515
]
Integrins
Integrin alpha subunits
103176450
CD molecules [BR:
cmk04090
]
Proteins
103176450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
TFIIE_alpha
LRR19-TM
Motif
Other DBs
NCBI-GeneID:
103176450
NCBI-ProteinID:
XP_007888185
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
MAAAGKWLLIHFSLFSFATRTSAFNLDADNVLKKTGDGNSLFGFALAMHHQVTPRKELML
LVGAPKAKALSNQNANITGGLYKCPITSAERDCERVIFDNDANDDESKEDQWMGVSVASQ
KVGGKVLVCAHRYEQRRYRNTATESREVTGQCYILSEDLVFRDYEFDANVKICHGRLSSH
KKFGICQQGVASTFGKDSDYAVYGVPGAYNWKGIVHVELRSTDFSIIDDGPYEVGDEGIR
DESKVPVPGNSYLGFSLDSGKGITNQDKLTFVSGAPRANHTGAVVFLKMLLHSRNLETEH
TLEGEGLASSFGYDVAVADLNSDGWNDIVVGAPQFFDKEAEIGGAVYIYINQKGDWSNIK
PIRLNGTKDSMFGLAVENIGDINKDGYEDIAVGAPYSERGQVFIYHGSSSGINTTPAQVL
EGKHLNAEYFGYSLTGRMDLDENNYPDIAVGSLGDSVFIYRARPVIDVKKTVTVSPQNID
FQKKNCNNGQAICMTVNACFQYTAYSNTYRPKITVQYLLDADTQRGKPDRQSRVSFVKAG
QNQDNHQLSGSVTLRGQNEEKCVTEKLQLRENIKDKLHPISIAVGVTINQSNRKKRQAGN
LQNLLPVLSQSEPAVAEVQFLKEGCGSDHVCQSNLKLNYRFCSRIDNQDRFNPLPKENGA
PVFKLSDQKDIVLEITVTNKPSNSQNPKKDGDDAHEAQLIATFPETLTYSAYRDLTIYQD
KQLICSANQNGSQATCDLGNPLKRGSKITFYLILSTAGITLNTRHLDINLQLKTTSEQAN
LTPVIAKARVVIELLLSVVGAANPSQVYFGGSVTGESAMKTEEDVGSLIQYEFRIINLGK
SLKNLDNARLVIMWPKEINNKKWLLYLMKITSKDIENVVCTPTSEINSLKLQESLKQSRK
KREINKVESEEKSRGTFSFFSEKRKYKTLDCNQHSTAPCINISCPLKGLDSSAVLVLRSR
LWNSTFLEEFSNLNYLDIIVKAMIVVESKANNVMVKNAVTEVRVTVFPEKTVIQYLGVPW
WIIFVAVLAGILMLALLIFLLWKCGFFKRSRYDDSVPRYHAVRIRKEEREPFEDRKCNQK
SDKKKWLTTWQENESYS
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcgggcaagtggcttctcatccatttctctttgttttccttcgcgacccgg
acttcagcttttaacttagacgcagacaatgtcctgaagaaaactggagacgggaacagc
ttgtttggctttgcactggctatgcaccatcaggtgaccccaaggaaagagctgatgttg
ctggttggagctccaaaagcaaaagcactttcaaatcaaaatgctaatatcacaggagga
ttgtacaaatgccccatcacttctgcagaaagagactgtgaacgggtcatttttgacaat
gatgctaacgatgatgaaagtaaggaagatcaatggatgggtgtatctgtggcaagtcag
aaagtgggaggaaaggttctggtttgtgcacatcgatacgagcaaagacggtataggaac
acagcgacagagtctcgtgaagtgacgggacagtgttatattttgagtgaggacctggtt
ttccgggactatgaatttgacgcaaatgtcaaaatttgccatggacgtctttcaagtcac
aagaaatttgggatttgccagcaaggagtagctagcacttttggcaaggacagcgattat
gctgtatatggtgttcctggtgcctacaactggaaaggaattgttcatgtggaattgaga
agcactgatttcagtatcattgacgatggaccctatgaagttggtgatgaaggcatcaga
gatgaatcaaaggttccggtgcctgggaacagttacctaggcttctctctggattcaggt
aaagggatcacaaaccaggacaaactgacttttgtatcgggtgcaccaagagccaaccat
actggggctgtagtttttctcaaaatgttacttcattcaagaaacctggagactgaacac
actttggaaggagaaggactggcatcttcttttggatatgatgtcgctgttgccgatctt
aacagtgatggctggaatgatattgtggttggagccccccagttctttgacaaagaagca
gaaatcggtggtgctgtctatatttacattaatcagaaaggggactggagtaacataaag
cccattcgcttaaatggcacgaaggactcgatgtttgggcttgctgttgaaaatataggt
gacattaacaaggatgggtatgaagatattgctgttggagcgccttattctgaaagaggc
caggtttttatttaccatggatcaagctctggaataaatacaacacctgcacaggttctt
gaagggaaacatttgaatgcagagtattttggctactctctgacagggagaatggatcta
gatgagaataattatcccgacattgccgtcggatcgcttggtgattctgtgtttatatac
agggctcgacctgttatagatgttaagaagaccgtgactgtttcacctcaaaatattgat
tttcaaaaaaagaactgcaacaatggccaagcaatttgtatgactgtcaacgcatgcttt
cagtacacggcttactccaatacttacagaccgaagataactgttcaatacctgcttgat
gctgacactcaaaggggaaagcctgatcgacaatcaagagtttcatttgttaaagcaggg
cagaatcaagataaccaccagctctctggcagtgttacgctgagggggcaaaatgaggag
aagtgtgttacagaaaaacttcagcttcgggagaatatcaaggataaactgcaccctatt
tcgatagcagttggagttacaatcaatcagtctaatcgcaagaaaagacaagctggtaac
ctgcagaatctacttccagtcctcagtcagagtgaacctgcagttgcagaggtacagttc
ttgaaagaaggatgtggttctgaccacgtttgccagagtaatcttaaattaaactatcgt
ttttgctccaggattgacaatcaggacaggtttaatcctttacccaaagagaatggtgct
ccagtatttaaattaagtgaccagaaggatatagtgctcgaaataactgttactaacaag
ccgtcaaattcacaaaatcctaaaaaggatggggatgatgcacatgaagcccaattgatt
gcaacttttccagaaactttaacctactctgcctatcgtgatttgacaatatatcaggac
aagcaattaatttgctcagcaaaccaaaatggctctcaagcaacttgtgatctaggtaac
cccttaaagagaggatcaaagattactttttatttgattctgagcactgctggaattaca
ctgaacaccagacaccttgatatcaatctacagctgaaaacgaccagcgagcaggctaac
ctgacccctgtgattgctaaagcacgagtggtgattgagttgcttctgtctgtagttggt
gctgcaaacccatctcaggtatactttggtggttcagtcacaggcgagagtgctatgaaa
actgaagaggatgtaggaagtttgattcaatatgaattcagaattatcaacctgggaaaa
tcccttaagaatctggataatgctcgtttagtcattatgtggcccaaggaaataaacaac
aaaaagtggctactatatttgatgaaaattacttctaaagacatagaaaatgtggtctgc
actcccacaagtgaaatcaatagcctcaaacttcaggaatcacttaaacaaagcaggaaa
aaaagggaaatcaacaaagtggaatcagaggagaagtcaagagggacattctctttcttt
tcagagaaaagaaaatataaaactctggattgtaaccaacactcaactgctccatgcatt
aatataagttgtcctctcaaaggtctggacagtagtgcagtcctggttttgcgttctcgg
ctttggaacagtactttcctggaggagttttcaaacctgaactaccttgatatcattgtt
aaagccatgatcgtagtagaatccaaggccaacaacgtgatggttaaaaatgcagtaaca
gaggtgcgagttaccgtattccctgaaaaaacagtaatccagtatcttggagttccttgg
tggatcatttttgttgctgttctagcaggaattctgatgttggcacttttaatattttta
ttgtggaagtgtggattttttaaacgttcccgatatgatgacagtgttccacgataccac
gcagttcggatccggaaagaagagcgagaaccgtttgaagacagaaaatgtaaccagaaa
tcggacaagaaaaagtggctgacaacttggcaagaaaatgagtcttattcctaa
DBGET
integrated database retrieval system