KEGG   Callorhinchus milii (elephant shark): 103176450
Entry
103176450         CDS       T03088                                 
Name
(RefSeq) integrin alpha-6 isoform X1
  KO
K06485  integrin alpha 6
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk04382  Cornified envelope formation
cmk04510  Focal adhesion
cmk04512  ECM-receptor interaction
cmk04514  Cell adhesion molecules
cmk04810  Regulation of actin cytoskeleton
cmk04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103176450
   04514 Cell adhesion molecules
    103176450
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103176450
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103176450
   04810 Regulation of actin cytoskeleton
    103176450
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    103176450
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmk04147]
    103176450
   04515 Cell adhesion molecules [BR:cmk04515]
    103176450
   04090 CD molecules [BR:cmk04090]
    103176450
Exosome [BR:cmk04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103176450
  Exosomal proteins of breast milk
   103176450
Cell adhesion molecules [BR:cmk04515]
 Integrins
  Integrin alpha subunits
   103176450
CD molecules [BR:cmk04090]
 Proteins
  103176450
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha TFIIE_alpha LRR19-TM
Other DBs
NCBI-GeneID: 103176450
NCBI-ProteinID: XP_007888185
LinkDB
Position
Unknown
AA seq 1097 aa
MAAAGKWLLIHFSLFSFATRTSAFNLDADNVLKKTGDGNSLFGFALAMHHQVTPRKELML
LVGAPKAKALSNQNANITGGLYKCPITSAERDCERVIFDNDANDDESKEDQWMGVSVASQ
KVGGKVLVCAHRYEQRRYRNTATESREVTGQCYILSEDLVFRDYEFDANVKICHGRLSSH
KKFGICQQGVASTFGKDSDYAVYGVPGAYNWKGIVHVELRSTDFSIIDDGPYEVGDEGIR
DESKVPVPGNSYLGFSLDSGKGITNQDKLTFVSGAPRANHTGAVVFLKMLLHSRNLETEH
TLEGEGLASSFGYDVAVADLNSDGWNDIVVGAPQFFDKEAEIGGAVYIYINQKGDWSNIK
PIRLNGTKDSMFGLAVENIGDINKDGYEDIAVGAPYSERGQVFIYHGSSSGINTTPAQVL
EGKHLNAEYFGYSLTGRMDLDENNYPDIAVGSLGDSVFIYRARPVIDVKKTVTVSPQNID
FQKKNCNNGQAICMTVNACFQYTAYSNTYRPKITVQYLLDADTQRGKPDRQSRVSFVKAG
QNQDNHQLSGSVTLRGQNEEKCVTEKLQLRENIKDKLHPISIAVGVTINQSNRKKRQAGN
LQNLLPVLSQSEPAVAEVQFLKEGCGSDHVCQSNLKLNYRFCSRIDNQDRFNPLPKENGA
PVFKLSDQKDIVLEITVTNKPSNSQNPKKDGDDAHEAQLIATFPETLTYSAYRDLTIYQD
KQLICSANQNGSQATCDLGNPLKRGSKITFYLILSTAGITLNTRHLDINLQLKTTSEQAN
LTPVIAKARVVIELLLSVVGAANPSQVYFGGSVTGESAMKTEEDVGSLIQYEFRIINLGK
SLKNLDNARLVIMWPKEINNKKWLLYLMKITSKDIENVVCTPTSEINSLKLQESLKQSRK
KREINKVESEEKSRGTFSFFSEKRKYKTLDCNQHSTAPCINISCPLKGLDSSAVLVLRSR
LWNSTFLEEFSNLNYLDIIVKAMIVVESKANNVMVKNAVTEVRVTVFPEKTVIQYLGVPW
WIIFVAVLAGILMLALLIFLLWKCGFFKRSRYDDSVPRYHAVRIRKEEREPFEDRKCNQK
SDKKKWLTTWQENESYS
NT seq 3294 nt   +upstreamnt  +downstreamnt
atggcggctgcgggcaagtggcttctcatccatttctctttgttttccttcgcgacccgg
acttcagcttttaacttagacgcagacaatgtcctgaagaaaactggagacgggaacagc
ttgtttggctttgcactggctatgcaccatcaggtgaccccaaggaaagagctgatgttg
ctggttggagctccaaaagcaaaagcactttcaaatcaaaatgctaatatcacaggagga
ttgtacaaatgccccatcacttctgcagaaagagactgtgaacgggtcatttttgacaat
gatgctaacgatgatgaaagtaaggaagatcaatggatgggtgtatctgtggcaagtcag
aaagtgggaggaaaggttctggtttgtgcacatcgatacgagcaaagacggtataggaac
acagcgacagagtctcgtgaagtgacgggacagtgttatattttgagtgaggacctggtt
ttccgggactatgaatttgacgcaaatgtcaaaatttgccatggacgtctttcaagtcac
aagaaatttgggatttgccagcaaggagtagctagcacttttggcaaggacagcgattat
gctgtatatggtgttcctggtgcctacaactggaaaggaattgttcatgtggaattgaga
agcactgatttcagtatcattgacgatggaccctatgaagttggtgatgaaggcatcaga
gatgaatcaaaggttccggtgcctgggaacagttacctaggcttctctctggattcaggt
aaagggatcacaaaccaggacaaactgacttttgtatcgggtgcaccaagagccaaccat
actggggctgtagtttttctcaaaatgttacttcattcaagaaacctggagactgaacac
actttggaaggagaaggactggcatcttcttttggatatgatgtcgctgttgccgatctt
aacagtgatggctggaatgatattgtggttggagccccccagttctttgacaaagaagca
gaaatcggtggtgctgtctatatttacattaatcagaaaggggactggagtaacataaag
cccattcgcttaaatggcacgaaggactcgatgtttgggcttgctgttgaaaatataggt
gacattaacaaggatgggtatgaagatattgctgttggagcgccttattctgaaagaggc
caggtttttatttaccatggatcaagctctggaataaatacaacacctgcacaggttctt
gaagggaaacatttgaatgcagagtattttggctactctctgacagggagaatggatcta
gatgagaataattatcccgacattgccgtcggatcgcttggtgattctgtgtttatatac
agggctcgacctgttatagatgttaagaagaccgtgactgtttcacctcaaaatattgat
tttcaaaaaaagaactgcaacaatggccaagcaatttgtatgactgtcaacgcatgcttt
cagtacacggcttactccaatacttacagaccgaagataactgttcaatacctgcttgat
gctgacactcaaaggggaaagcctgatcgacaatcaagagtttcatttgttaaagcaggg
cagaatcaagataaccaccagctctctggcagtgttacgctgagggggcaaaatgaggag
aagtgtgttacagaaaaacttcagcttcgggagaatatcaaggataaactgcaccctatt
tcgatagcagttggagttacaatcaatcagtctaatcgcaagaaaagacaagctggtaac
ctgcagaatctacttccagtcctcagtcagagtgaacctgcagttgcagaggtacagttc
ttgaaagaaggatgtggttctgaccacgtttgccagagtaatcttaaattaaactatcgt
ttttgctccaggattgacaatcaggacaggtttaatcctttacccaaagagaatggtgct
ccagtatttaaattaagtgaccagaaggatatagtgctcgaaataactgttactaacaag
ccgtcaaattcacaaaatcctaaaaaggatggggatgatgcacatgaagcccaattgatt
gcaacttttccagaaactttaacctactctgcctatcgtgatttgacaatatatcaggac
aagcaattaatttgctcagcaaaccaaaatggctctcaagcaacttgtgatctaggtaac
cccttaaagagaggatcaaagattactttttatttgattctgagcactgctggaattaca
ctgaacaccagacaccttgatatcaatctacagctgaaaacgaccagcgagcaggctaac
ctgacccctgtgattgctaaagcacgagtggtgattgagttgcttctgtctgtagttggt
gctgcaaacccatctcaggtatactttggtggttcagtcacaggcgagagtgctatgaaa
actgaagaggatgtaggaagtttgattcaatatgaattcagaattatcaacctgggaaaa
tcccttaagaatctggataatgctcgtttagtcattatgtggcccaaggaaataaacaac
aaaaagtggctactatatttgatgaaaattacttctaaagacatagaaaatgtggtctgc
actcccacaagtgaaatcaatagcctcaaacttcaggaatcacttaaacaaagcaggaaa
aaaagggaaatcaacaaagtggaatcagaggagaagtcaagagggacattctctttcttt
tcagagaaaagaaaatataaaactctggattgtaaccaacactcaactgctccatgcatt
aatataagttgtcctctcaaaggtctggacagtagtgcagtcctggttttgcgttctcgg
ctttggaacagtactttcctggaggagttttcaaacctgaactaccttgatatcattgtt
aaagccatgatcgtagtagaatccaaggccaacaacgtgatggttaaaaatgcagtaaca
gaggtgcgagttaccgtattccctgaaaaaacagtaatccagtatcttggagttccttgg
tggatcatttttgttgctgttctagcaggaattctgatgttggcacttttaatattttta
ttgtggaagtgtggattttttaaacgttcccgatatgatgacagtgttccacgataccac
gcagttcggatccggaaagaagagcgagaaccgtttgaagacagaaaatgtaaccagaaa
tcggacaagaaaaagtggctgacaacttggcaagaaaatgagtcttattcctaa

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