Callorhinchus milii (elephant shark): 103176529
Help
Entry
103176529 CDS
T03088
Symbol
pms1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmk03400
]
103176529 (pms1)
DNA repair and recombination proteins [BR:
cmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
103176529 (pms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
103176529
NCBI-ProteinID:
XP_007888328
UniProt:
A0A4W3J1W3
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MQHLPPETIRLLSSSQTISSVVSVVKELVENSLDANATNIEVKLENNGFDKIEVRDNGDG
IKAIDVPVMGLKHYTSKISQHEDLETLQTYGFRGEALCCICGVSGIIITTKTADDEVSTQ
YTLDNIGHVVSQKPSHMGQGTTVTVLRLFKNIPVRKQFYSTAKKCKEELKKIQDLLMAYS
IIKPELRIVFTHNKAIVWQKAKVSDHKKALLTVLGTAVMVSMVPFQHHEQEPEIFLSGFL
PKSGSNSSLTSLTSPDRSFIFVNSRPVHHKEILKMIRQYYAAQSQKDSSHIRYPICFLNI
LVSAAFVDVNLTPDKTQIMLLNKEAILSAIEKILISIYGTLPTTMAGEPSSECANKIEQL
SSDMLSDCRTIPLSETSQVTEATIPCSKTKEVSGDLGKEVNAVSNVALIESSEKSHKPGD
KPLCNILELDSTLALNNNSIFSKPRDATVMDICFENANNLSLSLETLKEAQKSIQIEQDT
VEMSAESWSMGHGVKDSAGQIIEPVKILIPGKIGGQNQTICDKDTQQTPTDTSPSKYQSK
SSSNVVQDKTGQITLYDLISNHTIRKALSPSALFMQETRLKLLAENPKTSLQDISVELED
MWKNLNEEEKKKFEEKAVKDLDRYNSQLKRVQTSHQGEKQQPKLNSVTKFVQKHKRRAPL
SNQQILDKLFESQTQKKTALEPSRKTVEVPFSLSSLKTQLQQLSKSFDSGGERLQLINRL
SCYNGWVIASGRKLMLLNPFRVEEALLYRRLMENHILPTQTLDTPISLSNSLLGGPQYID
RLCKMQKECSELNGVVSFTDPRLVFNGFKIQLIPGASTAEQHLHIQEMARCLPYYGVSDL
QEILRAVLTKNAQRVHQCRPLKVVNYLEGEAVRLIRQLPLHLSREDIEDMLVRMQQQLEK
ECNTCIHGRPFIHHLADLPEPE
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatctgccaccagagaccatacgacttctttcaagctcccagacaatatcctct
gttgtcagtgtagttaaggagctggtggaaaactctttggatgctaacgcaaccaacatc
gaagtgaaattagaaaataacgggtttgacaagatagaggtgagagacaatggagatggg
atcaaagccattgatgtccctgtcatgggactgaagcattacacatctaaaatcagccag
cacgaggacttggaaactctacaaacatatggatttcgtggagaggccttgtgctgcatc
tgtggtgtatcagggattatcatcacaactaagaccgctgatgatgaagtgagtacacag
tatactttggacaacatcggacatgtcgtttcacagaaaccttctcatatgggacaagga
acaactgtgactgttctaagactttttaagaacatccctgtgaggaaacagttttattcc
actgccaaaaaatgcaaagaggaactgaagaaaattcaagacctcctcatggcatatagt
ataataaaaccagagctcaggatcgttttcacacataataaggcgattgtatggcaaaag
gccaaggtgtcggatcacaaaaaggccctgctaacagttctgggaactgctgttatggtc
agcatggtacctttccaacatcacgaacaagagccagagatatttctcagcggttttctt
cccaaatcaggctccaactcttccttgacgagtctcacgagccctgacagaagttttatt
tttgttaattccagacctgttcaccacaaggaaatattaaagatgattcgacagtattat
gctgctcagtcccagaaggattcttcacatattcgttatccaatttgtttcctaaatatt
ttggtttcagctgcttttgtagacgtgaatttaacaccagataaaacacaaataatgctt
ctcaacaaggaagccatcttatctgctatcgaaaagatattgatttcaatatatgggaca
cttcctacaacaatggctggggaaccatcttctgaatgtgcaaacaaaattgaacagctt
agcagtgatatgctaagtgactgtcgtaccataccattatcggagacttctcaagtcaca
gaagcaacaattccttgttctaaaacaaaagaggtttctggtgatttgggtaaagaagtg
aatgcggtcagtaatgttgctctgattgaatcaagtgaaaagtctcataaacctggggac
aagcctttgtgtaacattctagaattggattcaacacttgcactaaataataatagtatt
ttttcaaagcctcgagatgctactgtcatggacatttgttttgaaaatgctaataatcta
agcctttcacttgagacattaaaggaagcacagaaatccattcaaattgagcaagacacc
gttgaaatgagtgctgagagctggagcatggggcatggagtgaaagactctgctggacaa
ataattgaacctgtaaagatcttaatacctggcaagattggaggtcaaaaccaaacaatc
tgtgacaaagatacacagcagactccaaccgatactagcccaagcaaatatcagagtaaa
agttcttccaatgtagtgcaggataaaactgggcagattacactatacgacttgatcagc
aatcacacaataagaaaggctttgtcaccctctgcccttttcatgcaagaaactcggcta
aaactgctagcagagaacccaaagaccagtctacaagatatcagcgtggaacttgaagat
atgtggaaaaatctgaatgaagaagagaaaaagaagtttgaggagaaagcggtaaaagat
ctggatcgctacaattcacagctgaagagagtgcaaacatctcatcaaggagagaaacaa
caacctaaattgaactcagtaacaaaatttgttcagaaacacaaacgtagagcaccactc
tcaaaccagcaaatcttagataaactctttgagtcacaaactcagaagaaaacagccttg
gagccatctcgtaaaacagttgaagttccgttttctttaagctctttgaaaacacaactc
caacaactttctaaaagctttgattcaggtggtgaaagacttcagctcatcaatcgcctg
tcctgctacaatggatgggttattgcctctggaaggaaactgatgttgttaaatccattt
cgggtggaggaggctttgctgtacagaagactgatggagaaccacatccttcccacacag
acacttgatacaccaatatctctaagtaacagcctgcttggtggaccccagtacatagat
cgtctctgtaaaatgcaaaaggaatgctcagagttgaatggggtggtttcttttacagat
cccaggcttgtattcaatggctttaagatacagctaataccaggtgcttcaacagcagaa
cagcacttgcatatccaggaaatggccaggtgtttaccctattatggtgtgtcagattta
caagaaattctacgtgcggttttaactaaaaatgctcagagagtacatcagtgcagacct
ctaaaagttgtaaattatttggagggagaggctgttcgtctgattcgacagctacctctg
catctctcgagagaagacattgaggacatgctcgtcaggatgcagcagcagctggaaaaa
gaatgtaatacatgtattcacggtcgcccatttatacaccatttagcagatttaccagaa
ccggagtga
DBGET
integrated database retrieval system
