Callorhinchus milii (elephant shark): 103176560
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Entry
103176560 CDS
T03088
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103176560 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103176560 (bard1)
04121 Ubiquitin system [BR:
cmk04121
]
103176560 (bard1)
03036 Chromosome and associated proteins [BR:
cmk03036
]
103176560 (bard1)
03400 DNA repair and recombination proteins [BR:
cmk03400
]
103176560 (bard1)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
103176560 (bard1)
Ubiquitin system [BR:
cmk04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
103176560 (bard1)
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
103176560 (bard1)
DNA repair and recombination proteins [BR:
cmk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
103176560 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_2
Ank_3
Ank_5
Ank_4
BRCT_2
BRCT
zf-RING_5
zf-C3HC4_2
zf-C3HC4
zf-RING_10
zf-RING_UBOX
ANK_LRRK2
Ank_KRIT1
zf-C3HC4_4
RTT107_BRCT_5
Prok-RING_4
zf-RING_2
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
103176560
NCBI-ProteinID:
XP_042192444
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MKVHSGNEMSGFGLRRPWARSGGALVLLERLLQCSACCKLLQEPVCLGGCEHVFCRSCVA
DSIGNGCPVCHAPAWVQDLQPNRQMNNMIQLCSQLRVLLDNKGSTDIKAVPSSTSSSSPQ
KMTDKKRQMRMWFSPRSRKMRCVLDMNLSMQDKKSSSSILAEDSSSVFEFLPSPPHLIGS
PKKKAPPKSKQTIRKRLVDANKVWGFGKIEGQKMEKDDKGCADNEKIIPFCSQPEIFSSP
RETVTGEATEESILSFAPPLPASDASSATTSKREDASFEQLHQTFEPKSILTPVTVPRKP
HAKRSRKRSDSSRGTTSKKSRQEDREASCLVNPSPNRSMKMREKSRPISEAKLPATPEPK
PGRNETVNGAQTFSLTNISCHTPTARCNSEKKQRAVVSGPLVQKSPCTPQMTPKTKLSGR
CTTPQTPPVTPTTKKNHKGETLLHLASIKGDVGAVEQLLENGADPNIKDNAGWTPLHEAC
NHGHAKVAELLLQYGALLNTPGYQNDSPLHDAVRNRHVDVVKLLISHRAAQEVVNIFGLR
PVDYADSEEMITALQHSPGDEASFRADQSFVVSMSQRRDGPILLLGSGLHSNLKKKLEKL
AKLLKAGTCTNFSSSVTHVIVPNDNNPSTMKCLMGILSGCWILNIQWVTACLENGVRVAE
EDHEIISANGPKCGRLNRQQQLPGLFDGCYFYFMGSFKIHVKEDLVDLVKVGGGQVLARQ
PKPDSDVTQSINTVAYHAHPGSDQSFCTQYIIYDKDSNFIPEKVRLGKVWSTCSTWLIDC
VKSFELLSVTNQGTK
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttcactcgggcaacgagatgtcggggttcgggctgaggcggccctgggcccgg
agcgggggggcgctggtgctgttggagcggctgctgcagtgctcggcatgttgtaagttg
ctgcaggagcctgtctgccttggaggatgtgaacatgtcttttgtagaagttgtgttgct
gactccattgggaatggctgtccagtctgccatgctccagcctgggtgcaagatctacag
ccaaacaggcagatgaacaacatgatccagttgtgcagccagcttcgagtattgctcgat
aataaaggctctacagatattaaagcagttccctcaagtacatcaagcagcagtcctcaa
aagatgactgataaaaagaggcaaatgagaatgtggttcagcccacgcagtagaaaaatg
agatgtgtgctggatatgaacctctctatgcaagacaaaaagagctcaagctccattctg
gctgaggattcatcctctgtgtttgaatttttaccatcaccacctcatctcattggctct
ccgaagaagaaagctccaccaaaatctaagcagacaataagaaaaaggttggttgatgcc
aataaagtgtggggctttggaaaaatagaaggccagaaaatggagaaagatgataagggc
tgtgcagataatgaaaaaataattccattctgtagccaaccagagattttcagcagtcca
cgagaaactgtcaccggagaggctactgaagaatcaatcctttcgtttgcacctccgctg
cctgcttctgatgcctcttctgcaacaacttctaagcgggaagacgcatcctttgagcag
ttgcaccaaacttttgagcctaaaagtattcttactcctgtcactgttcctaggaagcct
catgctaaacgatcaaggaaacgatcagattccagtaggggtactacctcaaaaaagagc
agacaagaagaccgagaagcgtcctgtcttgtaaacccttctccaaatcgcagtatgaaa
atgcgtgaaaagtccaggccaatctcagaagcaaaacttccagctacaccggaacccaag
cccggccggaatgagactgtaaatggggcacaaacgttttctctgacaaatatctcctgt
cacactccaactgcaagatgcaacagtgagaaaaagcaaagagcagtagtatccgggcct
ctggtacagaaatccccttgtacgccccaaatgacacccaaaacaaagctgtctggaaga
tgtacaacaccccaaacccctcctgtcactcccacaacaaaaaaaaaccataaaggcgag
actctactgcacttggcatccataaagggtgacgtgggagcagtggagcagctattagag
aatggagctgatccaaatatcaaagacaatgcaggatggacaccactgcatgaagcctgt
aaccatggtcatgcaaaggtggcagagctactgctgcagtatggtgctctgctgaataca
cctggataccagaatgattcacccctgcacgatgcagtcaggaacagacatgttgatgtt
gtcaaactgctgatctcacacagggctgcccaagaagtggtcaatatctttggtttgcgg
cccgtcgattatgcagattctgaagagatgattaccgctctacagcactcgcctggagat
gaagcttcatttcgtgctgatcagtcctttgtggtgagtatgagccagagaagagatggt
cccatactattgctgggaagtggactccattcaaacctcaagaaaaagcttgagaaatta
gccaaacttcttaaggctgggacttgcaccaacttcagtagctcagtgactcatgtaatt
gttcccaatgacaacaatccctccaccatgaagtgtctgatgggtatcctctcaggctgc
tggatactgaatattcagtgggtgactgcttgcctggagaacggggtcagagttgctgaa
gaagaccatgagataattagtgcaaatggccccaaatgtggacgtctcaaccggcaacag
cagctgccaggactgtttgacggctgctacttctatttcatgggcagctttaaaattcat
gtcaaagaagaccttgtggacttggtaaaagttggtggtggccaggtccttgcccgacag
cccaagccagatagtgatgtgactcagagcatcaacactgtagcctaccacgctcatcct
ggctcagatcagtcattctgtactcagtacatcatttacgacaaagacagcaactttata
ccagagaaagtaagactgggcaaagtatggtctacatgttctacatggctcattgactgt
gtgaagtcatttgagctgctttcagttactaatcaaggcacaaaatag
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