Callorhinchus milii (elephant shark): 103176576
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Entry
103176576 CDS
T03088
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-6
KO
K06485
integrin alpha 6
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04382
Cornified envelope formation
cmk04510
Focal adhesion
cmk04512
ECM-receptor interaction
cmk04514
Cell adhesion molecule (CAM) interaction
cmk04518
Integrin signaling
cmk04810
Regulation of actin cytoskeleton
cmk04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103176576
04514 Cell adhesion molecule (CAM) interaction
103176576
04518 Integrin signaling
103176576
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103176576
09142 Cell motility
04820 Cytoskeleton in muscle cells
103176576
04810 Regulation of actin cytoskeleton
103176576
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103176576
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmk04147
]
103176576
04515 Cell adhesion molecules [BR:
cmk04515
]
103176576
04090 CD molecules [BR:
cmk04090
]
103176576
Exosome [BR:
cmk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103176576
Exosomal proteins of breast milk
103176576
Cell adhesion molecules [BR:
cmk04515
]
Integrins
Integrin alpha subunits
103176576
CD molecules [BR:
cmk04090
]
Proteins
103176576
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Tmrp11_N
C2c1_WED-II
Motif
Other DBs
NCBI-GeneID:
103176576
NCBI-ProteinID:
XP_042192364
LinkDB
All DBs
Position
Unknown
AA seq
1075 aa
AA seq
DB search
MVATGKWFLIYFSLFSFTTWTSAFNLDTENVMKKTGDRNSLFGFALAMHHQVTPRKELML
LVGAPKAKALSNQNANITGGLYKCPITSAERDCERVIFDNNADNDESKENQWMGVSVASQ
KVGGKVLVCAHRYEQRRHRNTAIESRDVTGQCYILSEDLVFRDDQFDANVKICHGRLPSH
EKFGICQQGVASTFGKDSDYAVYGVPGAYYWKGIVHVESRSTDFTNFDDGPYEVGDENKR
DESKVPVPQNSYLGFSLDSGKGITNQDELTFVSGAPRDKHSGAVVFLKMVRQSNTLEAEH
ILKGEGLASSFGYDVAVVDLNKDGWNDIVVGAPQFFDKEAEIGGAVYVYINQKGDWSNIT
PIRLNGTKDSMFGLAVENIGDINKDGYEDIAVGAPFTEXGKVFIYHGSSSGINTRPVQVL
EGKHLNAENFGYSLAGGMDLDENNYPDIAIGSLGDSVFIYRARPVIDVKKTVTISPQNID
FFKKNCNNGQAFCMTVNACFQYTAYANTYRPKITVNYKIEADTERRKSVRESRVAFVKNG
QIQEYDQLSGSVALSEQNEEICVTEKLQLRENIKDKLHPISIGVGVTINQSNRKKRQAGN
LQNLLPVLSQNEPEAAKVQFLKEGCGPDHICQSNLKLNYNFCSRIDNQDRCSPFPKENGV
PVFKLSDQKDIVLEITVTNKPSNSQNPKKDGDDAHEAQLIATFPETLTYSAFNMKINQDK
KIICSANQNGSQATCDLGNPLKRGSKVTFYLILSIAGITPNSKHLEINLQLITTSEQANL
TPVIAKARVVIELLLSVAGAANPSQVYFGGSVTGESAMKTEEDVGSLIQYEFRIINLGKS
LKNLDNARLVIMWPKEINNKMWLLYLTKITSKNIENVVCSPTSEINSLKLKETPTQSRKK
REINKVESDKKSRGTFSFFSEERKYKTLDCTKNSTARCVNIKCPLKGLDSSAVLVLHSRL
WNSTFLEEFSNLNYLDIIVKAMIVVESEANNVVVKNAETEVRVTVFPDQRVAQHFGVPWW
IIFVAILLAILLLALLIFLLWKCGFFRKNRKGDTGYNKADIHIHPSDKERFTTDA
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggtggccacgggcaagtggtttctcatctatttctctttattttccttcacgacctgg
acttcagcttttaacttagacacagaaaatgtcatgaagaaaactggagacaggaacagc
ttgtttggctttgccctggctatgcaccatcaggtgaccccaaggaaagagctgatgttg
ctggttggagctccaaaagcaaaagcactttcaaatcaaaatgctaatatcacaggagga
ttgtacaaatgtcccatcacttctgcagaaagagactgtgaacgggtcatttttgacaat
aatgctgacaatgatgaaagcaaggaaaatcaatggatgggtgtatctgtggcaagccag
aaagtgggaggaaaggttctggtttgtgcacatcgatatgagcaaagacgacataggaac
acagccatagagtctcgtgacgtgacgggacagtgttatattttgagtgaggacctagtt
ttccgggacgatcaatttgatgcaaatgtcaaaatttgccatggacgtcttcccagtcac
gagaaatttgggatttgccagcaaggagtagctagcacttttggcaaggacagcgattat
gctgtatatggtgttcctggtgcctactactggaaaggaattgttcatgtggaatcgaga
agcactgatttcactaattttgatgatggaccctatgaagttggtgatgaaaacaaaagg
gatgagtcgaaagttcctgtgcctcagaacagttacctaggtttctctctggattcgggt
aaagggatcacaaaccaggacgaattgacttttgtatctggtgcaccaagagacaagcat
tctggagctgtagtttttctaaaaatggtacgccaatcaaacaccctagaggctgaacac
attttgaaaggagaaggactggcatcttcttttggatatgatgtcgctgttgttgatctt
aacaaggatggctggaatgatattgtggttggagccccccagttctttgacaaagaagca
gaaatcggtggtgctgtctatgtttacattaatcagaaaggggactggagtaacataaca
cccattcgcttaaatggcacgaaggactcgatgtttgggcttgctgttgaaaatataggt
gacattaacaaggatgggtatgaagatattgctgttggagcgcctttcactgaanggggg
aaggtttttatataccatggatcaagctctggaataaatacacgacctgtgcaggttctt
gaagggaaacatttgaatgcagaaaattttggctactctctagcagggggaatggatcta
gatgaaaataattatcccgatattgccatcggatctcttggtgattctgtatttatatac
agggctcgacctgttatagatgtcaagaagaccgtgactatttcacctcaaaatattgat
ttttttaaaaaaaactgcaataatggtcaagcattttgtatgactgtcaacgcatgcttt
cagtacacagcttacgccaatacttacagaccaaagataactgttaactataagattgaa
gctgacactgaaaggagaaagtcagttcgtgaatcgagagttgcatttgttaaaaacgga
cagattcaagagtacgaccagctctctggcagtgtggcactgagcgagcaaaacgaggag
atatgtgttacagagaaacttcagcttcgggagaatatcaaggataaactgcaccctatt
tctataggagttggagttacaatcaatcagtctaatcgcaagaaaagacaagctggtaac
ctgcagaatctacttccagtcctcagtcagaatgagcctgaggctgcaaaggtacagttc
ttgaaagaaggatgtggtcctgaccacatttgccagagtaatcttaaattaaactataat
ttttgctccaggattgacaatcaggacaggtgtagtcctttccccaaagaaaatggtgtt
ccagtatttaaattaagtgaccagaaggatatagtgctcgaaataactgttactaacaag
ccatcaaattcacaaaatcctaaaaaggatggggatgatgcacatgaagcccaattgatt
gcaacttttccagaaactttaacctactctgcttttaacatgaaaataaatcaggataag
aaaatcatttgctcagcaaaccaaaatggctctcaagcaacttgtgatctaggtaacccc
ttaaagagaggatcaaaggttactttttatttgattctgagcattgctggaattacaccg
aactccaaacaccttgagatcaatctacagctgataacgaccagcgagcaggctaacctg
acccctgtgattgctaaagcacgagtggtgattgaactgcttctgtctgtagctggtgct
gcaaacccatctcaggtatactttggtggttcagtcacaggcgagagtgctatgaaaact
gaagaggatgtaggaagtttgattcaatatgaattcagaattatcaacctgggaaaatcc
cttaagaatctggataatgctcgtttagtcattatgtggcccaaggaaataaacaacaaa
atgtggctactatatttgaccaaaattacttctaaaaacatagaaaatgtggtctgctct
cccacaagtgaaatcaatagcctcaaacttaaggaaacacctactcaaagcagaaaaaaa
agggaaatcaacaaagtggaatcggacaagaaatcaagagggacattctctttcttctca
gaggaaagaaaatataaaactctggattgtaccaaaaactcaactgctcgatgtgttaat
ataaaatgtcctctcaaaggtctggatagtagtgcagtcctggttttacattctcggctt
tggaacagtactttcctggaggagttttcaaacctgaactaccttgatatcattgttaaa
gccatgatcgtagtagaatctgaggccaacaacgtggtggttaaaaatgcagaaacagag
gtgcgagttactgtgttccctgaccaaagagtagctcaacatttcggagttccttggtgg
atcatttttgttgctattctacttgcaattctgctgttggcacttttaatatttttgttg
tggaagtgtggtttcttcaggaaaaacagaaaaggtgataccggatacaacaaggctgac
atccatattcatccatctgacaaagaaagatttaccactgatgcataa
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integrated database retrieval system
