Callorhinchus milii (elephant shark): 103176721
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Entry
103176721 CDS
T03088
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103176721 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103176721 (dhx36)
03012 Translation factors [BR:
cmk03012
]
103176721 (dhx36)
Enzymes [BR:
cmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103176721 (dhx36)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
103176721 (dhx36)
Translation factors [BR:
cmk03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
103176721 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
NB-ARC
AAA_14
Tn7_Tnp_TnsA_C
TsaE
ABC_tran
AAA_16
PhoH
NACHT
AAA_23
Motif
Other DBs
NCBI-GeneID:
103176721
NCBI-ProteinID:
XP_042195081
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MSGFSRHGGRGGAAFDRDGGGGGASGSGGARGRHPDHLKGRDIGLWYSRRQGQRSQDSER
QQRAVVHMDESREQHITRLLNSVQTRSDFKEPRVTLSADSSMNWRSGASTCPVSREVKPV
NKEIKSVFTADLEFLFQTINRDMFLDEELREDLEKKRVNSRYLEMKKFREKLPSYSMRNE
LVELINENQVVVISGETGCGKTTQVTQFILDDHIERGVGSLCRIACTQPRRISAISIAER
VAAERAETCGDGNSSGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSLLSTVSHLILDE
IHERSLHSDVLMTIVKDILPFRPDLKVVLMSATLNAEKFSQYFDRCPIIHIPGFTYPVRE
YILEDVVELIRYFPKEQVVRKTSSKRRFMQGCPSRPDKEQKEEEYQLQWAKYLRDLQDSY
SASTIEVLEMLDEDDKIDLNLIVALIRHIVLQGEDGAILVFLPGWDNISTLHDLLSSQTM
FQSDRFVIIPLHSLMPSVNQTEVFKKPPPGVRKIVIATNIAETSITIDDVVHVIDGGKIK
ETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQAGHCYHLYNGLRECLLDDYQLPEIMR
IPLEELCLQIKILRLGRIASFLEKVMQPPSKEAVELAVNHLKELNALDRNEELTPLGVHL
ARLPVEPHIGKMILFGALLCCLDPVLTIAASLSFKDPFVIPLGKEKIADGKRRELSKGSR
SDHLTVVNAFKGWEEAKRRGFRSERDYCWEFFLSANNLQMLHNMKSQFAEHLLGAGFVSG
RNPKDTRANINSENEKLIKAVICAGLYPKVAKIRPSFSKKRKMVKVSTKSDGRVNIHPKS
VNAEEGEFNHNWLIYHLKMRTSSIYLYDCTEVSPYSLLFFGGDISIQKEQDQETISVDEW
IVFQSPSRIAHLVKDLKKELDSLLQEKIEKPQPVDWNHRSKDCAVLSAIIDLITTQDNAT
ARNYAPRFQTY
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggttctcgaggcacggaggccgaggcggcgcggcctttgatcgcgatggcggc
ggcggcggcgccagtggcagcggcggggcgcgcggccgacacccggaccacctgaagggc
cgcgacatcgggctgtggtactcgcggcggcagggccagcgcagccaggacagcgagcgc
cagcagagggcggttgtgcacatggatgaatcccgtgagcagcatatcacacgactgctg
aattctgtgcagacacggagtgattttaaagaaccgcgtgtcaccttgtcagccgattcc
agcatgaactggagaagtggagcaagcacctgcccggttagcagagaagtgaagcccgtg
aacaaggaaataaaatccgtgttcactgcagacctggagtttctctttcaaaccattaat
cgggatatgtttttggacgaggagctgagggaagatctggaaaagaagagggtcaattcc
agatatctcgagatgaagaaattccgggaaaagctcccgtcttactccatgaggaacgag
ctggttgagttaataaatgaaaatcaagtggtggtaatcagtggagaaactggctgcggg
aagaccacccaagtgactcagtttattttggatgaccacattgagagaggagtgggctct
ctgtgccgcatcgcctgcacccagcctcgccgcatcagtgcaatctctatagctgagaga
gtggcagcggaaagagcagaaacctgtggagatggcaacagctctggttaccagatcagg
ctgcagagccggttgccacggaaacaaggctccatcttgtactgcaccacaggcatcatt
ctgcaatggcttcagtctgattcccttctgtccacggtcagtcatctgattttggatgaa
atccacgagaggagtttacattcggatgttctgatgacgattgtgaaggatattttaccg
ttcagacccgatctgaaggtggtcttgatgagtgccacactgaatgctgagaaattctca
caatactttgatagatgccccataattcacataccagggtttacttacccagtgagagag
tacattctggaggatgtagttgagttaatccgctatttcccaaaagagcaagttgttcgg
aaaacatcatctaagaggaggtttatgcaaggctgtccatctcgcccggacaaagagcaa
aaagaggaggaatatcagctgcaatgggcaaaatatctaagagatctgcaggatagctac
tctgctagcacaatcgaggttttagaaatgctggacgaggatgataagattgacctgaac
ctgatagtcgctctcattagacacattgttctccaaggggaggatggagccatattagtc
ttccttccgggctgggataatatcagcaccttgcatgaccttctcagctcacaaactatg
ttccaatcagaccggtttgtgattattcctcttcattcgctgatgccttcagtcaatcaa
accgaggtgtttaaaaagccacctccaggtgttcggaagattgtaattgccaccaacatt
gcagagaccagcatcaccatagatgatgtagttcatgtgatagatggagggaagataaaa
gaaacgcactttgatacccagaacaatatcagcacaatggcagcggagtgggtcagcaaa
gcgaatgccaaacagaggaaaggtcgggctggcagggtgcaggctggccactgctaccac
ttgtacaatggattgcgtgagtgtttgctggatgattatcagttacctgaaatcatgagg
attcctctggaagagctctgcttacagataaagatattaaggctcggtcgcattgcctct
ttcttggagaaggtaatgcagccaccatcgaaggaagctgttgaacttgctgtaaaccat
ctaaaggaactgaacgccttggataggaatgaagagcttactccgctcggggtacatcta
gcccggctgccagtggagccccacattgggaagatgattctatttggagccctgttgtgc
tgcttggatccagtcctcaccattgcagccagcctcagcttcaaggatccgttcgtgatc
ccactgggtaaagagaaaattgccgatgggaaaagacgagaattatctaaggggtctcgg
agtgaccatctgacagtggtgaacgcatttaagggctgggaagaagcaaaaagacgaggt
ttccggtcggaacgagactattgctgggaattcttcctttctgcaaacaatttgcagatg
cttcataacatgaagagtcagtttgctgagcacctgctaggggcaggctttgtcagcggg
agaaaccccaaggataccagagcaaatataaattcagagaatgaaaagctgattaaagca
gtcatctgtgctgggttatatcccaaggtggcaaagatccgacccagtttcagcaagaag
aggaaaatggttaaagtttccacaaaatccgatggaagggttaacatccaccccaagtca
gtgaatgccgaggagggcgagtttaatcacaactggctgatctaccacctgaagatgcga
acgagcagtatctacctgtacgattgcactgaagtctctccttactcgctgctgttcttc
ggaggagatatctcgatccagaaggagcaggaccaggagaccatttctgttgacgaatgg
attgtttttcagtccccgtccagaatagcacatttagttaaggatctgaagaaagaatta
gactctctgctacaagagaagattgaaaagccacagcctgtggactggaaccatcgatct
aaggactgcgctgttctgtccgccatcatagacctgatcaccacacaggacaatgccacc
gccaggaattatgcgcctcgattccagacctactga
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